Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  153 bits (386), Expect = 3e-41
 Identities = 118/406 (29%), Positives = 203/406 (50%), Gaps = 27/406 (6%)

Query: 225 TFSDADSHWFAVSQTEIDG----ENKLFTIIDIQQIVQTYKRDIQ-LIIAGFSGFSCVML 279
           T   AD+ W  + Q  +        KL + ++ Q+    +   I  L+IAG  G   + L
Sbjct: 320 TIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGI-GLLVIWL 378

Query: 280 IGLYWVLSKELSGV-RQIREWILALSD-----GQIKERRPIKFHNELDTIAQSLENLQFR 333
           +G          G+ R +++ +  L+D     G +  R      +EL  IA        +
Sbjct: 379 VG---------HGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIK 429

Query: 334 LLDVVR---NSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDV 390
           L  ++    +S + ++D S    DI        +    E   I+QVATA  +++ T+ DV
Sbjct: 430 LQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVE---IDQVATAVHEMTATAQDV 486

Query: 391 MQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVT 450
            + A  A   A  A +  ++   I+  +S     +   I ++  ++  L + S+NI+++ 
Sbjct: 487 ARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAIL 546

Query: 451 DVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQ 510
             I  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA KTQ++T +IQ +I +LQ
Sbjct: 547 TAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQ 606

Query: 511 EQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTE 570
           + ++   +VM  + S   E+         +   I+  V  I+++N+ +++AA EQ  V E
Sbjct: 607 QGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAE 666

Query: 571 DVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           D+ + + +I  +  E     + +  A+ +++ L       ++ FK+
Sbjct: 667 DINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712