Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  156 bits (394), Expect = 3e-42
 Identities = 114/353 (32%), Positives = 188/353 (53%), Gaps = 6/353 (1%)

Query: 269 AGFSGFSCVMLIGLYWVLSKELSGVRQIREWILALSD---GQIKERRPIKFH--NELDTI 323
           A F G +  +++ L   L    S VR ++  + A+ +   G+    R +  H  +E+  +
Sbjct: 193 ASFIGLAIALVMALLVSLIAR-SIVRPLQAAVNAMGNIASGESDLTRSLDTHGQDEVTQL 251

Query: 324 AQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQL 383
           ++   +   +L  VV       N L     ++  +     + SQQ+   +E VATA  ++
Sbjct: 252 SRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQMELVATAINEV 311

Query: 384 SCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFS 443
           +    DV + A+ A      AQ    +    IDSS +Q + ++ +I ++ ++I  L   S
Sbjct: 312 TYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVEVIRTLSAES 371

Query: 444 DNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQ 503
             I SV +VI +I+DQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ+ST +IQ
Sbjct: 372 TQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQ 431

Query: 504 GIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAAN 563
           G+I +LQ  S+ A +V++ + S    T        AS   I + +  ++ +N+ +++A  
Sbjct: 432 GMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGLNASIASATL 491

Query: 564 EQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           +Q  V ED+ + + +   L      A E++  A+ ++  L+  L+  L  FK+
Sbjct: 492 QQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGLLRQFKV 544