Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  159 bits (402), Expect = 3e-43
 Identities = 104/324 (32%), Positives = 174/324 (53%), Gaps = 7/324 (2%)

Query: 295 QIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTD 354
           ++ E I  L+DG++ +R   ++    D++   L+N   RL D +          +++ + 
Sbjct: 227 EVAEAIRRLADGELNQRIETRYP---DSVMGILKNALARLSDTISEVRSAAQ--ALRHSS 281

Query: 355 ITYSIEGNTNNSQQELGLIE--QVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESH 412
           +T     + N  Q  L   E   VA A TQ++ +  +V   A +A      A   +   H
Sbjct: 282 VTLLSVASDNRQQINLQTSEAQHVAAAITQMAASVSEVSGYASAASKATILADAEVDSGH 341

Query: 413 DIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAA 472
            ++   +   E +   +  +   +NQ+   S+NI +V +VIN I+ QTNLLALNAAIEAA
Sbjct: 342 RLVGEVTVSIEELATILDHATLRVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIEAA 401

Query: 473 RAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQV 532
           RAGE GRGFAVVADEVRSLA +TQ+ST +I+ +I KLQ  +Q A  +M R+ SL   T  
Sbjct: 402 RAGEHGRGFAVVADEVRSLATRTQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVT 461

Query: 533 ANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMER 592
             R    +   IS +V  I+ +N+ +++ + +Q    E+VA+ +  I     ++ +  E+
Sbjct: 462 QTRDSQLALGKISQEVGAINAMNAQIASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGSEQ 521

Query: 593 TKQANQNISDLTTNLNDALSFFKI 616
            + +N  +++L   L+  ++FF +
Sbjct: 522 VENSNHELAELADRLSTKVAFFNV 545