Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (514), Expect = 3e-56
 Identities = 121/338 (35%), Positives = 202/338 (59%), Gaps = 9/338 (2%)

Query: 284 WVLSKEL-SGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSH 342
           W+LS ++ + +  ++  +  L+ G +  +      NE+  ++Q +     +L   V    
Sbjct: 228 WLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLT 287

Query: 343 RTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAE 402
           R   +++   T++   +    +N+Q EL  IEQVA+A  +L+ T+ +V   A SA+  A 
Sbjct: 288 RISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAR 347

Query: 403 TAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNL 462
            A +L      I   SS+ +E + L+++++ +++ +L+E S+ IS+V +VI  +SDQTNL
Sbjct: 348 EADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNL 407

Query: 463 LALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTR 522
           LALNAAIEAARAGE GRGFAVVADEVR LA +TQ ST +IQ II +LQ QS +A+  M  
Sbjct: 408 LALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQT 467

Query: 523 NVSLIHE----TQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMED 578
           ++ ++ +    T  AN ALI     I++ V +I++ N+ V+TAA +Q  VT+D+ + + +
Sbjct: 468 SLDMLTQNKALTAKANDALIG----ITESVSDINDSNAQVATAAEQQSHVTQDINRNVSN 523

Query: 579 IRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           +  LV +N++ + ++  A+  +S L       LSFFK+
Sbjct: 524 MSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561