Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (435), Expect = 5e-47
 Identities = 157/634 (24%), Positives = 289/634 (45%), Gaps = 32/634 (5%)

Query: 8   VFLLLACIITLAFTAFFYHSKLSDQTKSISSLSSQQAQERLQSYQDSLDFYKKLNTSLSV 67
           ++  +  ++T++       + LS + + I SL+++  Q +L  +   L+F+ K       
Sbjct: 16  IYASVVILVTISLMVLGTINMLSLKREMIDSLTTE-TQNKLNYHVSELEFWVKSRYEAVS 74

Query: 68  AIANSLRDKA--VEELNAIALRIQENHGFIGVTFASLDGTMFTDI----GTLDWNAKTLR 121
             AN    +    + LN + L + E      V  A  DG  +  +    G      K   
Sbjct: 75  RGANLFTPELSDTDNLNKVRL-LAEAAQITNVIAAYEDGRSYMSMDKEGGVTTNRFKFTD 133

Query: 122 RDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVYVGNDIVGSVALDIAGDQIASPNGS 181
           RDW+ +     +   T    D+ TG+ V++  +P+      VG++  D   D I +   +
Sbjct: 134 RDWYQQAKSRRSPFLTEIYQDQVTGKKVISAVSPILHQGQFVGALLGDFQLDDIITQVSN 193

Query: 182 -----GMFMMTDRNFNVFASDLTHSTLIGKDLTKEKPLFKNLVSGQYVTFSDADSHWFAV 236
                G   +TD+N   FASD  +   IG+  ++  P F+ + +G +   S   S  F  
Sbjct: 194 MRFAGGAATLTDKNAVFFASDDPND--IGRTPSQVSPSFREMEAGFHRQESGHLS--FPY 249

Query: 237 SQTEIDGENKLFTIID-----IQQIVQ--TYKRDIQLIIAGFSGFSCVMLIGL-----YW 284
              E DG  K   + D     +   V   T   D+ + +A  +  + ++LIG+      +
Sbjct: 250 LGIEFDGYYKRVNLTDDMYWTLMVFVDKATALADVDVAVAN-AITTGIVLIGISVGVIIF 308

Query: 285 VLSKELSGVRQIREWILALSDGQ--IKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSH 342
           ++++    + +++  +L L+ G   +  R  +  +++L  I++        L +++    
Sbjct: 309 IINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQIS 368

Query: 343 RTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAE 402
                +S     ++ + + N           +QV TA TQ+S ++  V +    +    E
Sbjct: 369 DATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITE 428

Query: 403 TAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNL 462
            A K   +S  I++++      +   +    + I+ +   ++ IS V  VI  IS+QTNL
Sbjct: 429 AASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNL 488

Query: 463 LALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTR 522
           LALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ ST +I  ++ KL E +      M R
Sbjct: 489 LALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMER 548

Query: 523 NVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYL 582
                  T      +  S N++S  V +I ++++ ++ A  +Q  V  ++++ M  IR +
Sbjct: 549 TKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREI 608

Query: 583 VQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           V+  + +  +T  A +++S     L   +  FK+
Sbjct: 609 VESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642