Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (402), Expect = 3e-43
 Identities = 113/365 (30%), Positives = 191/365 (52%), Gaps = 4/365 (1%)

Query: 255 QIVQTYKRDIQLIIAGFSGFSCVMLIGLYWVLSKELSG-VRQIREWILALSDGQIKER-- 311
           QI+ + K      +A       +M++ + W+L++ + G +  + +   A++ G + +   
Sbjct: 179 QILSSVKTLNSTSVASNIAILAIMVL-MTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMD 237

Query: 312 RPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELG 371
           R    ++EL T+A + E +Q  L  ++      +  LS    ++T     + +  +++  
Sbjct: 238 RSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQY 297

Query: 372 LIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHE 431
            I QVATA  Q+     DV +  + +   A  A     E      S  +  + V   I E
Sbjct: 298 QITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGE 357

Query: 432 SQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 491
           + Q +++L + S  I+ V DVI +I+DQTNLLALNAAIEAARAGE GRGFAVVADEVR+L
Sbjct: 358 AGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTL 417

Query: 492 AVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEI 551
           A +TQ ST +I  II KLQ  ++ A     R+ S I +         +    I + +  I
Sbjct: 418 AGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANI 477

Query: 552 SNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDAL 611
           +++ + +++A +EQ  V +++++ +E+I    QE     ++T QA + ++ L  +L D L
Sbjct: 478 ADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTL 537

Query: 612 SFFKI 616
             FKI
Sbjct: 538 RRFKI 542