Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (414), Expect = 1e-44
 Identities = 140/511 (27%), Positives = 241/511 (47%), Gaps = 27/511 (5%)

Query: 122 RDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVYVGNDIVGSVALDIAGDQIA----- 176
           R W++   +L T   +   +D  T + ++T + P+Y  ND+ G +  DI  D +      
Sbjct: 127 RSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVIFFDIPLDDVQELIKS 186

Query: 177 -SPNGSGMFMMTDRNFNVFASDLTHSTLIGKDLTKEKPLFKNLVSGQYVTFSDADSHWFA 235
            +P  +G   + D +  +   +   + + GK+L  +   F   VS       +  ++   
Sbjct: 187 YNPFDAGTIFIVDNSGKIIFGN--KNDISGKNLFGDFDSFPLSVSESKTKDKNGVNYDVL 244

Query: 236 VSQTEIDGENKLFTIIDIQQIVQTYKRDIQLIIAGFSGFSCVMLIGLYWVL-----SKEL 290
           +  ++  G N L +IID  +     + DI + +   S F+ V+L  +++ +        L
Sbjct: 245 IKMSDFGGWN-LVSIIDHDKA----RSDI-ITLRNNSIFTAVILASVFFAILLFTMRLML 298

Query: 291 SGVRQIREWILALSDGQ--IKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDL 348
             + Q+ + ++ +S G   +  R P     E   I  S       L  +V         +
Sbjct: 299 KPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKI 358

Query: 349 SIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLI 408
           +   T+    +E   N+   +   ++ +A++  ++  TS  + Q    A   +E   K+ 
Sbjct: 359 NCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEA---SEITSKIN 415

Query: 409 AESHDIIDSSSKQTEMV---TLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLAL 465
            + ++ + + S  TE V      + +++ +I  L   + NI  +   IN+I+DQTNLLAL
Sbjct: 416 GQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLAL 475

Query: 466 NAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVS 525
           NAAIEAARAGE GRGFAVVADEVRSLA+KTQ+ST +I  II  LQE S L+  VM  + +
Sbjct: 476 NAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFN 535

Query: 526 LIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQE 585
           +  ET   +       + IS  V++I +I + V+TAA EQ  V+E++      I+     
Sbjct: 536 IASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDKADT 595

Query: 586 NLSAMERTKQANQNISDLTTNLNDALSFFKI 616
             S   +  Q   +   L  + +D +S F I
Sbjct: 596 LSSLGNKISQQAYSQKALIGHQDDLISKFII 626