Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 9e-44
 Identities = 105/337 (31%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 284 WVLSKELS-GVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSH 342
           W +++++   +RQ       ++ G + +   ++  +EL  +  S+  +   L +++    
Sbjct: 305 WAITRQIIIPLRQTLRAAERVASGDLTQSLQVQRRDELGQLQASMHRMTQGLRELIGGIG 364

Query: 343 RTMNDLSIKQTD---ITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAEL 399
             +  ++    +   +T       NN + E    +QVATA  Q++ T  +V + A+ A  
Sbjct: 365 DGVTQIASAAEELSAVTEQTSAGVNNQKVET---DQVATAMNQMTATVHEVARNAEQASE 421

Query: 400 NAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQ 459
            A  A +   E   ++  +  Q E +   +  S + +N L+  SD I SV DVI +++ Q
Sbjct: 422 AALMADQQAREGDRVVGEAVAQIERLASEVVNSSEAMNLLKTESDKIGSVLDVIKSVAQQ 481

Query: 460 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQV 519
           TNLLALNAAIEAARAGE GRGFAVVADEVRSLA +TQQST +I+ +I  LQ  +Q    V
Sbjct: 482 TNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQQSTEEIEELIAGLQSGTQRVASV 541

Query: 520 MTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDI 579
           M  +  L   +    R   +S   I+  V  I  +N  ++TAA EQ  V E++ + + ++
Sbjct: 542 MDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAMNQQIATAAEEQTAVAEEINRSVMNV 601

Query: 580 RYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           R +  +  +A E T  ++  ++ L T+L   +  F++
Sbjct: 602 RDISDQTSAASEETASSSVELARLGTHLQGLVGRFRL 638