Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  137 bits (346), Expect = 9e-37
 Identities = 82/230 (35%), Positives = 131/230 (56%), Gaps = 4/230 (1%)

Query: 374 EQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQ 433
           EQVA A  Q++ T+ +V    Q      + A +L ++   I   + +  E ++ ++ E+ 
Sbjct: 279 EQVAAAVNQMAATTQEVANHVQRTADATQEANRLTSQGRQIAGETREAIERLSAAVGETG 338

Query: 434 QIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAV 493
           Q + QL + SD I  V DVI  I+DQTNLLALNAAIEAARAGE GRGFAVVADEVR LA 
Sbjct: 339 QTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQ 398

Query: 494 KTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNL--ISDKVLEI 551
           +T +ST  I G+I KLQ+ +  ++ V+T         +  +R + A   L  IS+ V  I
Sbjct: 399 RTAESTGQIHGLIAKLQQTA--SNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANI 456

Query: 552 SNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNIS 601
           +++ + ++ A  EQ  V +++++ +  I  L  +     + +   ++ ++
Sbjct: 457 TDMATQIAAATEEQTAVADEISRNISTIAELADQTAEQAQHSALLSEELT 506



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 11/117 (9%)

Query: 372 LIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHD-----------IIDSSSK 420
           L ++ A +T Q+      + Q A +A L  ET  +   E  D           I ++ + 
Sbjct: 396 LAQRTAESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVAN 455

Query: 421 QTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQ 477
            T+M T     +++      E S NIS++ ++ +  ++Q    AL +    + AG Q
Sbjct: 456 ITDMATQIAAATEEQTAVADEISRNISTIAELADQTAEQAQHSALLSEELTSTAGSQ 512