Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  159 bits (401), Expect = 5e-43
 Identities = 123/452 (27%), Positives = 212/452 (46%), Gaps = 26/452 (5%)

Query: 181 SGMFMMTDRNFNVFASDLTHSTLIGKDLTKEKPLFKNLVSGQYVTFSDADSHWFAVSQTE 240
           +G   + D N  + A   T   L+GK   K   +  +  SGQ +     +   FA++ ++
Sbjct: 195 TGFVFLVDGNGTIIAHPNTE--LLGK--AKLASISDSSTSGQLL-----NRQGFAMATSD 245

Query: 241 IDGENKLFTIIDIQQ-----IVQTYKRDI---------QLIIAGFSGFSCVMLIGLYWV- 285
             G+ +LF    +++     + Q  + ++         Q+II          LIG++   
Sbjct: 246 AAGDTQLFASTYVEKAGWYVVAQVPEHELYASLNAGSRQIIIWALVIAGAFALIGIWLAG 305

Query: 286 -LSKELSGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRT 344
            L+K L  +  + +  L    G ++ R P+    E+  + +   N    L   +    +T
Sbjct: 306 TLTKPLESLADVFQQ-LGRGQGDLRSRIPMPEQKEIARLVEGFNNFIDHLHGTISQVAKT 364

Query: 345 MNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETA 404
            + L     D+        N+++ +     Q A A T++  T  +V Q A  A  NA  A
Sbjct: 365 SHALKASAQDVAKQSHQTENSTKSQRDQTLQAAAALTEMGSTVNEVAQSATHAAQNANMA 424

Query: 405 QKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLA 464
               A   +I   +      ++  I +  ++I  L E +  I  + D I  IS+QTNLLA
Sbjct: 425 TTNSAHGREITQRAVHAINGLSGQIQDVSRVIQSLDEHTAAIGGILDTIRGISEQTNLLA 484

Query: 465 LNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNV 524
           LNAAIEAARAG+ GRGF+VVADEVR+LA +  Q+T +IQ  I K Q+ S+ A   M  + 
Sbjct: 485 LNAAIEAARAGDHGRGFSVVADEVRTLAQRAAQATDEIQVKIDKFQQDSKSAVSQMESSR 544

Query: 525 SLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQ 584
           +   +   A   +      I++++  I+++N+ V+TA  EQ  V ED+++ + DI    +
Sbjct: 545 ARTTDVVTATNEIDKLLQDIAEEIAHINDVNTQVATATEEQATVVEDISRNINDISASSE 604

Query: 585 ENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           E L+A +     +  + +L   L+  +S FK+
Sbjct: 605 ETLNATKILVSVSDKLDELAQELSSEVSRFKL 636