Pairwise Alignments

Query, 1013 a.a., peptidase M66 from Vibrio cholerae E7946 ATCC 55056

Subject, 886 a.a., metalloprotease StcE from Escherichia coli ECRC98

 Score =  229 bits (584), Expect = 6e-64
 Identities = 130/312 (41%), Positives = 196/312 (62%), Gaps = 17/312 (5%)

Query: 242 ENNKVVSYSNSYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDL 301
           ENN++ +Y+   WSAE+P + +  G++L  +   GNL    ++ IK  AP EL++  ID+
Sbjct: 237 ENNRI-TYAQHIWSAELPAHWIVPGLNLVIKQ--GNLSGRLND-IKIGAPGELLLHTIDI 292

Query: 302 GMLYKPRGRNIVIKELERTAVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADI 361
           GML  PR R    K+ E    +YFQ +PVS++I ++Y P+H +++ LP G + T+     
Sbjct: 293 GMLTTPRDRFDFAKDKEAHR-EYFQTIPVSRMIVNNYAPLHLKEVMLPTGELLTDMDPGN 351

Query: 362 GGWHQGDMREAVGKALVSTGINNANLGIVASSGYSQQ-YNRLTNHITAHTNIGYYNNGVV 420
           GGWH G MR+ +GK LVS GI+NAN G+ +++G  +  +  +   + AH + G Y NG+ 
Sbjct: 352 GGWHSGTMRQRIGKELVSHGIDNANYGLNSTAGLGENSHPYVVAQLAAHNSRGNYANGIQ 411

Query: 421 VHGGSGGGGIVTLENTLHNEWSHELGHNYGLGHYVAG--GTSH----GPDTSWGWDGYYK 474
           VHGGSGGGGIVTL++TL NE+SHE+GHNYGLGHYV G  G+ H      +++WGWD   K
Sbjct: 412 VHGGSGGGGIVTLDSTLGNEFSHEVGHNYGLGHYVDGFKGSVHRSAENNNSTWGWDSDKK 471

Query: 475 RFIANFDWKRSPQSNIRPDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVA 534
           RFI NF   ++ + +    N +  +PF D + + +DAM+GG        +R+T++ P  +
Sbjct: 472 RFIPNFYPSQTNEKSCL--NNQCQEPF-DGHKFGFDAMAGGSPF--SAANRFTMYTPNSS 526

Query: 535 RIIQDWLKNGAV 546
            IIQ + +N AV
Sbjct: 527 AIIQRFFENKAV 538



 Score = 39.7 bits (91), Expect = 9e-07
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 148 NEIDYYHTTEIEKNVYGSLEGEVRFVQTHVI--SPEGRKNEPEIITGRDALILFKPSIKN 205
           N   Y++T++   ++ GSL  EV+F Q+ ++   P+   ++P + + R +L+L +P +K 
Sbjct: 27  NSAIYFNTSQPINDLQGSLAAEVKFAQSQILPAHPKEGDSQPHLTSLRKSLLLVRP-VKA 85

Query: 206 SSSILMKIYSEDG---LTSKVVMKSPSMLPKT--------DQPIDIDENNKVVSYSNSYW 254
                +++ + D    +   + +  PS LP T        +  ID   +N      N+  
Sbjct: 86  DDKTPVQVEARDDNNKILGTLTLYPPSSLPDTIYHLDGVPEGGIDFTPHNGTKKIINTV- 144

Query: 255 SAEIPWNKMKSGMSLHFEDENGNL 278
            AE+      SG S+H    N  L
Sbjct: 145 -AEVNKLSDASGSSIHSHLTNNAL 167



 Score = 37.7 bits (86), Expect = 4e-06
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 572 PIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYG 605
           P + GVPV T++G YDP+    S +YP  Y  YG
Sbjct: 669 PEQFGVPVTTLVGYYDPEGTLSSYIYPAMYGAYG 702



 Score = 31.6 bits (70), Expect = 3e-04
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 757 WAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESISIPNYRIEKNQSNKIHLNISREKPII 816
           + FT +    N +    N+C L++  K+  +    + N+R      NK H+N+  E    
Sbjct: 701 YGFTYSDDSQNLS---DNDCQLQVDTKEGQLR-FRLANHRANNTVMNKFHINVPTESQPT 756

Query: 817 DINVYCGEHELTSIKVSDNPD 837
              + C    L +  ++  P+
Sbjct: 757 QATLVCNNKILDTKSLTPAPE 777