Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 21/269 (7%)

Query: 29  GISRPTLRKWAKRYKQCGIAGLESQSRRPH---SSPDTKLTDELRALILTMRDKRNLGAR 85
           GI R T  +W  RY + G   LE +   P    +     + D++  L L   ++  L  R
Sbjct: 30  GIPRRTFYRWYDRYLEGGPEALEDRPSAPSRVWNRIPAGIHDQIIELAL---EQSELSPR 86

Query: 86  RLQTELIRLHKIHLSTATLHKVLS--EASVKPIVTYRRKKDFQRYERPIPGDRVQMDTC- 142
            L        +  +S +T++++L   +    P     +  D    +   P +  Q D   
Sbjct: 87  ELAVRFTDGQRYFVSESTVYRLLKAHDLITSPAYVVIKAADQFHTKTTRPNEMWQTDFTY 146

Query: 143 -KIAPGIYQY--TAIDDCSRYRVL-RCYSRRTAANTVDFIDCVV------EEMPFPIQRI 192
            KI    + Y  T +DD SRY +  +  +   A +  D +D  +              R+
Sbjct: 147 FKIIGWGWMYLSTVLDDFSRYIIAWKLCTNMRAEDVTDTLDLALAASGCDSATVLHKPRL 206

Query: 193 QTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQ 252
            +D G  + A ++ + +    +      P  P   GK+ER  +T K+          G  
Sbjct: 207 LSDNGPSYIAGELAEYIEARKMSHVRGAPCHPQTQGKIERWHQTLKNRILLENYFLPG-- 264

Query: 253 ELDLLLAEWQHYYNWERPHSSLNGLTPID 281
           +L+  +  +  +YN +R H SL  +TP D
Sbjct: 265 DLEAHIEAFVEHYNHQRYHESLANVTPAD 293