Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., transposase from Pseudomonas putida KT2440

 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 18/146 (12%)

Query: 145 APGIYQYTAIDDCSRYRVLRCYSRRT---AANTVDFIDCVVEEMPFPIQR--------IQ 193
           A G + Y A+       VL  Y+RR    A +     D VV+ +    ++          
Sbjct: 117 AQGKWHYLAV-------VLDLYARRVVGWALSEKPDADLVVKALDVAYEQRGKPQGLLFH 169

Query: 194 TDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQE 253
           +D+G ++ + + +++L  Y ++   ++ G+   N  +ER  ++ KSE+ PT     G Q 
Sbjct: 170 SDQGSQYGSRQFRQRLWRYRMRQSMSRRGNCWDNAPMERVFRSLKSEWIPTTGYLTGQQA 229

Query: 254 LDLLLAEWQHYYNWERPHSSLNGLTP 279
              +      +YNW RPH   NGL P
Sbjct: 230 QRDISQYLMRHYNWIRPHQFNNGLAP 255