Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., IS481 family transposase from Paraburkholderia sabiae LMG 24235

 Score =  100 bits (248), Expect = 7e-26
 Identities = 88/276 (31%), Positives = 127/276 (46%), Gaps = 23/276 (8%)

Query: 24  VCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSSPDTKLTDELRALILTMRDKRNLG 83
           +CRR  ISR T  KW  R+K  G  GL  +SRRPH SP  +  + + A +L +R +   G
Sbjct: 29  LCRRYRISRQTGYKWLDRHKAEGPGGLADRSRRPHHSP-LRSPEHIEARVLELRREHGWG 87

Query: 84  ARRLQTELIRLHKIHL-STATLHKVLSEASVKPIVTYRRKKDFQRYERPIPGDRVQMD-- 140
            R+++  L  L +  + + AT+ ++L    +      ++++ +QR+E   P    QMD  
Sbjct: 88  GRKIERRLRDLGETEVPAPATITEILRRHGLIDEQASQQRQHWQRFEHAHPNLLWQMDFK 147

Query: 141 ----TCKIAPGIYQYTAIDDCSRYR-VLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTD 195
               T K        T IDD SRY  VL   SR T       ++        P  RI TD
Sbjct: 148 GDVQTLKDG-RCMPLTVIDDHSRYNLVLSACSRTTTQVVQAELERAFRCYGLP-ARINTD 205

Query: 196 RGREFFAEKVQKQ-------LMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFY--PTID 246
            G  + +     Q       L+  GI+   ++P  P  NGK ER  +T K+E     T  
Sbjct: 206 NGAPWGSPGAPGQLTELAVWLIRLGIEVSYSRPYHPQTNGKDERFHRTLKAEVLDRQTFS 265

Query: 247 VSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDR 282
               +Q+    L  W+H YN ERPH +L   TPI R
Sbjct: 266 THAHMQQ---ALDRWRHVYNVERPHEALGMATPITR 298