Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., IS481 family transposase from Paraburkholderia sabiae LMG 24235

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 97/323 (30%), Positives = 143/323 (44%), Gaps = 28/323 (8%)

Query: 24  VCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSSPDTKLTDELRALILTMRDKRNLG 83
           +CRR  ISR T  KW  R+K  G  GL  +SRRPH SP  +  + + A +L +R +   G
Sbjct: 29  LCRRYRISRQTGYKWLDRHKAEGPGGLADRSRRPHHSP-LRSPEHIEARVLELRREHGWG 87

Query: 84  ARRLQTELIRLHKIHL-STATLHKVLSEASVKPIVTYRRKKDFQRYERPIPGDRVQMD-- 140
            R+++  L  L +  + + AT+ ++L    +      ++++ +QR+E   P    QMD  
Sbjct: 88  GRKIERRLKDLGETEVPAPATITEILRRHGLIDEQASQQRQHWQRFEHAHPNLLWQMDFK 147

Query: 141 ----TCKIAPGIYQYTAIDDCSRYR-VLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTD 195
               T K        T IDD SRY  VL   SR T       ++        P  RI TD
Sbjct: 148 GDVQTLKDG-RCMPLTVIDDHSRYNLVLSACSRTTTQVVQAELERAFRCYGLP-ARINTD 205

Query: 196 RGREFFAEKVQKQ-------LMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVS 248
            G  + +     Q       L+  GI    ++P  P  NGK ER  +T K+E       S
Sbjct: 206 NGAPWGSPSAPGQLTELAVWLIRLGILVSYSRPYHPQTNGKDERFHRTLKAEVLDRQAFS 265

Query: 249 VGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDR----ITEISDQTPLSE-----EVSQN 299
                +   L  W+H YN ERPH +L   TPI R    +  + ++ P  E     EV + 
Sbjct: 266 TH-AHMQQALDRWRHVYNVERPHEALGMATPITRYACSLRAMPERVPEPEYGPGDEVLRV 324

Query: 300 YQIKKERFQEQNYKLDLQLRKLK 322
                 R + Q  KL + L+ L+
Sbjct: 325 NASGVVRLRGQKLKLSIALKGLQ 347