Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., IS481 family transposase from Dickeya dianthicola ME23

 Score =  456 bits (1172), Expect = e-133
 Identities = 223/325 (68%), Positives = 262/325 (80%), Gaps = 2/325 (0%)

Query: 1   MDREIQQRLQWVKMYEECGDAGLVCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSS 60
           MDREIQQRL WVK+YE  GDAGLVCRRCGISRPTLRKW +RY   GI GLES SRRP  S
Sbjct: 1   MDREIQQRLLWVKLYETSGDAGLVCRRCGISRPTLRKWWRRYLAQGIVGLESHSRRPKRS 60

Query: 61  PDTKLTDELRALILTMRDKRNLGARRLQTELIRLHKIHLSTATLHKVLSEASVKPIVTYR 120
           P TK      ALIL +R  RNLGARR+Q+EL RL  + L+ AT+HK+L    VKP+V +R
Sbjct: 61  PATKTGPNEVALILELRTLRNLGARRIQSELKRLRSLSLAIATIHKILCRHQVKPVVKFR 120

Query: 121 RKKDFQRYERPIPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDC 180
           RK DF  YE P+PG+RVQMDTCKI PG+YQYT++DDC+RYRVLR YSRRTAANT+DFID 
Sbjct: 121 RKADFICYECPVPGERVQMDTCKIGPGLYQYTSVDDCTRYRVLRLYSRRTAANTLDFIDG 180

Query: 181 VVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSE 240
           V+EEMPFPIQRIQTDRGREFFA KVQ++L ++GIKFRPNKP SPHLNGKVERSQKTDK+E
Sbjct: 181 VIEEMPFPIQRIQTDRGREFFAVKVQEKLKMHGIKFRPNKPASPHLNGKVERSQKTDKAE 240

Query: 241 FYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLSEEVSQNY 300
           FY T++++    +L  LLAEWQHYYNWERPHS+ NG TP++R  E+++QTP S+ V  NY
Sbjct: 241 FYATVNLAA--TDLRDLLAEWQHYYNWERPHSAHNGKTPMERYFELAEQTPYSDAVHANY 298

Query: 301 QIKKERFQEQNYKLDLQLRKLKPSL 325
              +E  QEQNYKL+L+LRKLK  L
Sbjct: 299 HPDEEHIQEQNYKLELELRKLKRCL 323