Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., IS481 family transposase from Dickeya dianthicola ME23

 Score =  437 bits (1125), Expect = e-127
 Identities = 221/328 (67%), Positives = 257/328 (78%), Gaps = 6/328 (1%)

Query: 1   MDREIQQRLQWVKMYEECGDAGLVCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSS 60
           MDREIQQRL WVK+YE  GDAGLVCRRCGISRPTLRKW  RY   GI  LE+ SRRP  S
Sbjct: 1   MDREIQQRLLWVKLYETSGDAGLVCRRCGISRPTLRKWWHRYLVQGIVSLENHSRRPKRS 60

Query: 61  PDTKLTDELRALILTMRDKRNLGARRLQTELIRLHKIHLSTA--TLHKVLSEASVKPIVT 118
           P TK      ALIL +R  RNLGARR+Q+EL RL  + LS A  T++K+L    VKP+V 
Sbjct: 61  PATKTGPNEVALILELRTLRNLGARRIQSELKRLRSLSLSLAMATIYKILCRYQVKPVVK 120

Query: 119 YRRKKDFQRYERPIPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFI 178
           +RRK DF RYERP+PGDRVQMDTCKI PG+YQY ++DDC+RYRVLR YSRRTAANT+DFI
Sbjct: 121 FRRKADFIRYERPVPGDRVQMDTCKIGPGLYQYISVDDCTRYRVLRLYSRRTAANTLDFI 180

Query: 179 DCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDK 238
           D V+EEMPFPIQRIQTDRGREFFA KVQ++L  YGIKFRPNKP SPHLNGK E SQKTDK
Sbjct: 181 DGVIEEMPFPIQRIQTDRGREFFAVKVQEKLKKYGIKFRPNKPVSPHLNGKAEPSQKTDK 240

Query: 239 SEFYPTIDV-SVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLSEEVS 297
           +EFY T+D+ + GL+    LLAEWQH YNWERPHS+ +G TP++R  E+++QT  S+ V 
Sbjct: 241 AEFYATVDLTATGLKN---LLAEWQHDYNWERPHSAHHGKTPMERYFELAEQTRFSDAVH 297

Query: 298 QNYQIKKERFQEQNYKLDLQLRKLKPSL 325
            NY   +E  QEQNYKL+L+LRKLK  L
Sbjct: 298 ANYHPDEEHIQEQNYKLELELRKLKRCL 325