Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 153 a.a., Integrase core domain protein from Alteromonas macleodii MIT1002

 Score =  234 bits (597), Expect = 1e-66
 Identities = 115/155 (74%), Positives = 130/155 (83%), Gaps = 3/155 (1%)

Query: 139 MDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGR 198
           MDTCKIAPGIYQYTAIDDCSRYRVL  ++RR+AANT+ FID V+EEMPFPIQRIQTDRG 
Sbjct: 1   MDTCKIAPGIYQYTAIDDCSRYRVLDVFNRRSAANTLIFIDKVIEEMPFPIQRIQTDRGT 60

Query: 199 EFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQEL-DLL 257
           EFFAEKVQ++LM YGIKFRPNKPGSPHLNGKVERSQ+TDK EFY T  V++ L EL +  
Sbjct: 61  EFFAEKVQRKLMDYGIKFRPNKPGSPHLNGKVERSQRTDKEEFYST--VNLNLDELKNET 118

Query: 258 LAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPL 292
           L EWQHYYNW+R H SL G TP+D + E  +Q PL
Sbjct: 119 LPEWQHYYNWQRAHGSLKGKTPMDIVCERLEQAPL 153