Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

 Score = 78.2 bits (191), Expect = 2e-18
 Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 39/373 (10%)

Query: 218 PNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDAL-----QTQSTKVLFVAHR 272
           P   Q+ A+       A+G  R L+V+ATG GKT+  AF  +       Q  ++LF+A R
Sbjct: 166 PRYYQMNAINRTVEAVARGQDRVLLVMATGTGKTY-TAFQIIWRLWKSKQKKRILFLADR 224

Query: 273 EEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIG---KQNHLQRFAADHFD 329
             ++ Q +    +    A T +       +  + L    A  G   + N  ++F+ D FD
Sbjct: 225 NILVDQTKNNDFKPFGQAMTKIARRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFFD 284

Query: 330 YIVVDEFHHAAA---RSYRNLLTYFKPKFLLGLTATPERSDQADILSLCDSNLVFERNLV 386
            IV+DE H  +A    ++R +L YF     +GLTATP+ + +   ++      V+   L 
Sbjct: 285 LIVIDECHRGSAAEDSAWREILGYFSNATHVGLTATPKETKEVSSITYF-GEPVYSYTLK 343

Query: 387 HGIDEKILVPFDYHGI-YDQAVNYQEIPW----RNGKFDPD------SLDNALATQRRAE 435
            GI++  L P+    I +D+ +     P     +NG+   D       +D  L  + R +
Sbjct: 344 QGIEDGFLAPYKVVRIDFDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIETRTQ 403

Query: 436 HVYQHWHQKKQT-----RTLAFCVSKKHADFMAEFCLSKGIKAIA--------VYSDSKV 482
            V Q   +  +      +T+ FC    HA+ M +  ++   + +A        +  D + 
Sbjct: 404 LVAQKVTEFLKASDPFQKTIVFCDDINHAERMRQALVNLNPERVAENRKYVMRITGDDQE 463

Query: 483 RRNQALQWLDSGK--IDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS 540
            + +   +++  +    I  +  L   G D      I++ +  +S   F Q +GRG R +
Sbjct: 464 GKAELDNFINPEERYPVIATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRIN 523

Query: 541 IETQKSKLVVIDF 553
            +  K    ++DF
Sbjct: 524 EDFGKYWFTIMDF 536