Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 675 a.a., excinuclease ABC subunit B from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 44.3 bits (103), Expect = 3e-08
 Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 12/174 (6%)

Query: 384 NLVHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQRRAEHVYQHWHQ 443
           +L+H +      P DY     + V  ++I    G  DP+ ++   +T +  + + +   +
Sbjct: 382 SLMHQVVFVSATPGDYEIQKSEGVIVEQIIRPTGLLDPE-IEIRPSTNQVDDLLDEIDER 440

Query: 444 KKQ-TRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSK-VRRNQALQWLDSGKIDILFS 501
            K+  R L   ++K+ ++ +A++     IK   ++S+ K + R + L+ L  G ID+L  
Sbjct: 441 VKEGARVLVTTLTKRMSEELAKYLERLNIKVKYLHSEVKTLDRVEILRELRLGVIDVLIG 500

Query: 502 VDLFNEGTDLPAIDTILMLRPTESKIL-----FLQQLGRGLRRSIETQKSKLVV 550
           V+L  EG DLP +  + +L   +   L      +Q +GR  R     +K K+++
Sbjct: 501 VNLLREGLDLPEVSLVAILDADKEGFLRDQRSLIQTMGRAAR----NEKGKVIM 550



 Score = 26.6 bits (57), Expect = 0.006
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 218 PNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILL 277
           P   Q +A+  L     +G    +++ ATG GKT+  A + ++      L + H + +  
Sbjct: 11  PTGDQPKAIAQLTEGINKGEPSQVLLGATGTGKTFTMA-NVIKNTGKPTLVLCHNKTLAA 69

Query: 278 QAEKTFCQLIPN 289
           Q    F Q  P+
Sbjct: 70  QLYGEFKQFFPD 81