Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., DNA helicase from Magnetospirillum magneticum AMB-1

 Score =  103 bits (256), Expect = 4e-26
 Identities = 96/356 (26%), Positives = 164/356 (46%), Gaps = 30/356 (8%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTW-LAAF--DALQT-QSTKVLFVAHREEILL 277
           Q  ALTA+     +     L+V+ T  GK   L+AF  + L+     ++L V H  E++ 
Sbjct: 8   QQAALTAIYDYFGRKSGHPLIVIPTAGGKALVLSAFIKEVLENWPDQRILVVTHVRELIA 67

Query: 278 QAEKTFCQLIPNAKTGLYNGVT--QNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDE 335
           Q       L P+A  G+Y+     ++  A +LFA + +I    H + +     D +++DE
Sbjct: 68  QNYAELIGLWPDAPAGIYSAGLGKRDLGARILFAGIQSI----HKRAYDIQQCDLVLIDE 123

Query: 336 FH------HAAARSYRNLLTYFKPKF-LLGLTATPERSDQADILS---LCDSNLVFERNL 385
            H          R + + L    P   ++G TATP R D   +        +++ +E ++
Sbjct: 124 AHLIPCASDTMYRRFLDTLARINPHLKVIGFTATPYRLDSGMLHEGGGALFTDIAYEVSV 183

Query: 386 VHGIDEKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNAL----ATQRRAEHVYQHW 441
              ID   L P        + ++   +  R G+F P  L  A+     T+   + V  + 
Sbjct: 184 RDLIDAGFLCPLVSKSAATK-LDVTGVGSRGGEFIPSQLQAAVDKDSITRAAIDEVVAYG 242

Query: 442 HQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDS-KVRRNQALQWLDSGKIDILF 500
             ++    LAFC   +HA+ +A+    +G     ++ D+ K  R++ +     G+I  L 
Sbjct: 243 QDRRSW--LAFCSGVEHAEHVAQAIRDRGFSCATIFGDTPKGERDRIIVAFKRGEIRALA 300

Query: 501 SVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGN 556
           S+ +   G + PA+D I MLRPT+S  L++Q  GRG R  +   KS  +V+DF GN
Sbjct: 301 SMGVLTTGFNAPAVDLIAMLRPTKSAGLYVQMAGRGTR--LSPGKSNCLVLDFAGN 354