Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 84.0 bits (206), Expect = 3e-20
 Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 49/372 (13%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEK 281
           Q EA+ A  +   +  +  ++VL TG GK+ + A +  +    +VL +AH +E++ Q   
Sbjct: 9   QQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIA-ELARVARGRVLVLAHVKELVAQNHA 67

Query: 282 TFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAA 341
            +C L   A         + +Q  ++F SV ++ +  +L  F  + F  ++VDE H    
Sbjct: 68  KYCALGLEADIFAAGLKRKESQGKVVFGSVQSVAR--NLDAFQ-EEFSLLIVDECHRIGD 124

Query: 342 ---RSYRNLLTYFK---PKF-LLGLTATPERSDQADILSL----------------CDSN 378
                Y+ +LT+     P   LLGLTATP R  +  I                   C   
Sbjct: 125 DEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGNDNALFRDCIYE 184

Query: 379 LVFERNLVHGI---DEKILVP---FDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQR 432
           L     + HG     E++ +P   +D+  +  Q+         NG F    L+  L  Q+
Sbjct: 185 LPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS---------NGLFSEADLNRELKKQQ 235

Query: 433 R-AEHVYQHWHQKKQTR--TLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQ 489
           R   H+     +  QTR   + F  + +HA  +    L     A+         R+  + 
Sbjct: 236 RITPHIISQIMEFAQTRKGVMIFAATVEHAKEIVGL-LPADDAALITGDTPGPERDALID 294

Query: 490 WLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLV 549
              + +   L +V +   G D P +D I +LRPTES  L+ Q +GRGLR  +   K+  +
Sbjct: 295 NFKAQRFRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLR--LAPGKTDCL 352

Query: 550 VIDFIGN-HDSF 560
           ++D+ GN HD +
Sbjct: 353 ILDYAGNPHDLY 364