Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1169 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 55.5 bits (132), Expect = 2e-11
 Identities = 97/406 (23%), Positives = 155/406 (38%), Gaps = 72/406 (17%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAA---FDALQTQSTK-VLFVAHREEILL 277
           Q +A+ A+      G    L+ +ATG GKT  A    F  +Q+Q  K VLF+  R  +  
Sbjct: 448 QEDAVRAVEQAIVNGQQHILLAMATGTGKTRTAIALMFRLIQSQRFKRVLFLVDRRSLGE 507

Query: 278 QAEKTFCQLIPNAKT--GLYN--GVTQNTQAMLLFASVATIGKQNHLQR-------FAAD 326
           QA   F     N  T   +++  G+T           VAT+  Q+ ++R           
Sbjct: 508 QALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATV--QSLVKRTLQSDEPMPVG 565

Query: 327 HFDYIVVDEFHHAA-------------------ARSYRNLLTYFKPKFLLGLTATPERSD 367
            +D IVVDE H                        +YR +L +F     + LTATP    
Sbjct: 566 RYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDA-VKIALTATPALHT 624

Query: 368 QADILSLCDSNLVFERNLVHG--IDE----KILVPFDYHGIYDQAVNYQEIPWRNGKFDP 421
             DI         +   ++ G  ID+    +I+      G+Y       E     G+   
Sbjct: 625 -VDIFGEPVYRYTYRTAVIDGYLIDQDPPIQIVTRNAQDGVYLSEGEQVERLNPQGELIN 683

Query: 422 DSL----DNALATQRRA-----------EHVYQHWHQKKQTRTLAFCVSKKHADFMAEFC 466
           D+L    D  +A   R              + ++     Q +TL FCV+  HAD + +  
Sbjct: 684 DTLADDQDFEVADFNRGLVIPAFNRAVCGELTKYLDPTGQQKTLVFCVTNAHADMVVDEL 743

Query: 467 LSKGIKAIAVYS-------------DSKVRRNQALQWLDSGKIDILFSVDLFNEGTDLPA 513
            S   K                   D+K  ++  +++      +I+ +VDL   G D+P+
Sbjct: 744 RSAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVRFNKERLPNIVVTVDLLTTGVDIPS 803

Query: 514 IDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGNHDS 559
           I  I+ LR  +S+IL+ Q  GR  R      K+   + D +  + S
Sbjct: 804 ICNIVFLRKVKSRILYEQMKGRATRLCPSVGKTSFKIFDCVDIYSS 849