Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., DEAD/DEAH box helicase from Erwinia tracheiphila SCR3

 Score = 93.2 bits (230), Expect = 4e-23
 Identities = 100/363 (27%), Positives = 172/363 (47%), Gaps = 32/363 (8%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEK 281
           Q EA+ A      +  +  ++VL TG GK+ + A  A + +  +VL +AH +E++ Q   
Sbjct: 9   QHEAVEATLNYFRRSCAPAVIVLPTGAGKSLVIAELAKRARG-RVLVLAHVKELVAQNHS 67

Query: 282 TFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHH--- 338
            +     NA         + +Q+ ++FASV ++ +  +LQ+F ++ F  ++VDE H    
Sbjct: 68  KYQSYGLNADIFAAGLQRRESQSKVVFASVQSVAR--NLQQFDSE-FTLLIVDECHRISD 124

Query: 339 AAARSYRNLLTYFKPKF----LLGLTATPERSDQADILSL-CDS-----------NLVFE 382
           A    Y+ +L Y + +     LLGLTATP R  +  I    C             + ++E
Sbjct: 125 AEDSQYQQILHYLRLRSPQLRLLGLTATPYRLGKGWIYQFHCHGMVRGDEHALFRDCIYE 184

Query: 383 RNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWR-NGKFDPDSLDNALATQRR-AEHVYQH 440
             + + I    LVP +   +     ++  I  + NG F    L++ L  QRR   H+ + 
Sbjct: 185 LPMRYMIKNGFLVPPERLDMPVVQYDFSRIAVKENGLFSEADLNHELKQQRRITPHIIRQ 244

Query: 441 WHQKKQTR--TLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDSGKIDI 498
             +  Q+R   + F  + +HA  +A   L     A+   +   V R+  +    + ++  
Sbjct: 245 IIEFAQSRQGVMIFAATVEHAREVAG--LLPDDNALITAATPAVERDALIAAFKARQLRY 302

Query: 499 LFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGN-H 557
           L +V +   G D P +D I +LRPTES  L+ Q +GRGLR  +   K   +++D+ GN H
Sbjct: 303 LVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLR--LCPGKRDCLILDYAGNPH 360

Query: 558 DSF 560
           D F
Sbjct: 361 DIF 363