Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., DNA or RNA helicases of superfamily II from Enterobacter asburiae PDN3

 Score = 87.0 bits (214), Expect = 3e-21
 Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 49/372 (13%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEK 281
           Q EA+ A  A   +      +VL TG GK+ + A +  +    +VL +AH +E++ Q   
Sbjct: 9   QQEAVDATLAWFRKHREPAAIVLPTGAGKSLVIA-ELARLARGRVLVLAHVKELVAQNHA 67

Query: 282 TFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAA 341
            +C L   A         + +   ++F SV ++ +   L R     F  ++VDE H  + 
Sbjct: 68  KYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDLFR---SEFSLLIVDECHRISD 124

Query: 342 ---RSYRNLLTYFK---PKF-LLGLTATP----------------ERSDQADILSLCDSN 378
                Y+ +L + K   P   LLGLTATP                 R D   + S C   
Sbjct: 125 DDDSQYQQILAHLKAVNPHLRLLGLTATPFRLGKGWIYRYHYHGMVRGDDKALFSDCIYE 184

Query: 379 LVFERNLVHGI---DEKILVP---FDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQR 432
           L     + HG     E++ +P   +D+  +  Q+         NG F    L+  L  Q+
Sbjct: 185 LPLRYMIKHGYLTPPERLDMPVVQYDFSRLQSQS---------NGLFSEADLNQELKKQK 235

Query: 433 R-AEHVYQHWHQKKQTR--TLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQ 489
           R   H+     +   TR   + F  + +HA  +    L  G  A+         R+  + 
Sbjct: 236 RITPHIISQIEEFAATRKGVMIFAATVEHAREITGL-LPAGDAALITGEMPGPERDGLVD 294

Query: 490 WLDSGKIDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLV 549
              + +   L +V +   G D P +D I +LRPTES  L+ Q +GRGLR  +   K+  +
Sbjct: 295 AFKAQRFRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLR--LAPGKTDCL 352

Query: 550 VIDFIGN-HDSF 560
           ++D+ GN HD +
Sbjct: 353 ILDYAGNPHDLY 364