Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 786 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC102

 Score = 70.1 bits (170), Expect = 6e-16
 Identities = 92/347 (26%), Positives = 144/347 (41%), Gaps = 32/347 (9%)

Query: 220 AVQVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQA 279
           A Q EA++AL       +  G++   T  GKT  AA   +  +    L + HR E+L Q 
Sbjct: 426 AEQEEAVSALLR-----YDTGVLCAPTAFGKTVTAAA-VIAKRKVNTLILVHRTELLKQW 479

Query: 280 EKTFCQLIPNAKT-GLYNGVTQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHH 338
           ++     +    + G+  G        +  A V +I +Q  ++    + +  I+VDE HH
Sbjct: 480 QERLAVFLQAGDSIGIIGGGKHKPCGNIDIAVVQSISRQGEVEPLVRN-YGQIIVDECHH 538

Query: 339 AAARSYRNLLTYFKPKFLLGLTATPERSD--QADILSLCDS---NLVFERNLVHGIDEKI 393
             A S+  +L     ++LLGLTATP R D     I   C +     V  +   H ++  I
Sbjct: 539 IGAVSFSAILKETNARYLLGLTATPIRRDGLHPIIFMYCGAIRHTAVRPKESPHNLEVLI 598

Query: 394 LVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQRRAEHVYQHWHQKKQTRTLAFC 453
              F   G        Q+I +R    D D       T   AE   + + Q +  + L   
Sbjct: 599 RSRFT-SGHLPSDARIQDI-FREIALDHD------RTVAIAEEAMKAFGQGR--KVLVLT 648

Query: 454 VSKKHADFMAEFCLSKGIKAIAVYSD-SKVRRNQALQWL-----DSGKIDILFSVDLFNE 507
               H D +A    S  +    ++   SK +R   +  L     DS +I +L +  L  E
Sbjct: 649 ERTDHLDEIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRI-LLSTGRLIGE 707

Query: 508 GTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFI 554
           G D P +DT+++  P   K    Q  GR  R    T KS + +IDF+
Sbjct: 708 GFDHPPLDTLILAMPVSWKGTLQQYAGRLHRE--HTGKSDVRIIDFV 752