Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 818 a.a., Type I site-specific restriction-modification system, R (restriction) subunit and related helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 69.3 bits (168), Expect = 1e-15
 Identities = 101/443 (22%), Positives = 169/443 (38%), Gaps = 74/443 (16%)

Query: 187 DHYLERYQQAKKQH---GMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVV 243
           +  L++Y+Q K  H      +            +P   Q  A+       A G  R L+V
Sbjct: 134 EELLKKYKQYKGIHTSEAQEVALQDYYFDGSGRSPRYYQQIAVNRTVEAVANGQGRILLV 193

Query: 244 LATGMGKTWLAAFDALQT-----QSTKVLFVAHREEILLQAEKTFC-------------- 284
           +ATG GKT+  AF  +          ++LF+A R  ++ Q  +                 
Sbjct: 194 MATGTGKTY-TAFQIIHRLWKSRAKKRILFLADRTALIDQTRRGDFKHFKDKMTIIKKKV 252

Query: 285 --------QLIPNAKTGLYNGVTQNTQAMLLFASVATIGK-QNHLQRFAADHFDYIVVDE 335
                   +L+ N K G+          + L+  +      ++  + F+ + FD IV+DE
Sbjct: 253 VSRADGKEELVSNNKRGIDTEDKAYEVFLGLYQGLTNASDIEDAYKDFSPEFFDLIVIDE 312

Query: 336 FHHAAAR---SYRNLLTYFKPKFLLGLTATPERSDQADILSLCDSNLVFERNLVHGIDEK 392
            H  +A+   ++R +L YF     +GLTATP+ + +   +     + ++  +L  GID+ 
Sbjct: 313 CHRGSAKEDSAWREILRYFNKATHIGLTATPKETKEVSNIEYF-GDPIYTYSLKQGIDDG 371

Query: 393 ILVPFDYHGIYDQAVNYQEIPWR--NGKFDPD------------SLDNALATQRRAEHVY 438
            L P+    +    +N     WR   GK D D              D  L    R + V 
Sbjct: 372 FLAPY---RVVRVNLNVDAEGWRPEQGKKDKDGKEVEDRVYNRKDFDKTLVIDERTQTVA 428

Query: 439 QHWHQ-----KKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDS 493
           +   +      +  +T+ FC    HA+ M  F LS  + A  V  + K    Q     D 
Sbjct: 429 RKLTEFLKGYDRFAKTIVFCSDIDHAERM-RFALS-NLNADLVAKNHKYIM-QITGDNDE 485

Query: 494 GKID-------------ILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRS 540
           GK +             I  + +L   G D      I++    +S   F Q +GRG R +
Sbjct: 486 GKRELDNFINPEETYPVIATTSELMTTGVDAQTCRVIVLDAEIKSMTKFKQIVGRGTRIN 545

Query: 541 IETQKSKLVVIDFIGNHDSFLNR 563
            E  K    ++DF    D F ++
Sbjct: 546 EEFGKMFFTILDFRNVTDLFADK 568