Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., DEAD/DEAH box helicase from Phocaeicola dorei CL03T12C01

 Score = 67.8 bits (164), Expect = 1e-15
 Identities = 88/350 (25%), Positives = 148/350 (42%), Gaps = 43/350 (12%)

Query: 238 SRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNG 297
           +  ++VL TG GK+ + A  A +     ++F   +E IL Q  K  C         +Y+ 
Sbjct: 26  TNAIMVLPTGSGKSLIIADIAARLDGHTLVFQPSKE-ILEQNFKKLCSY-GILDCSIYSA 83

Query: 298 VTQNTQ-AMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARS--YRNLLTYFKPK 354
              + + + + FA++ ++  +NH + F   HF  I+VDE H    +   Y++     K K
Sbjct: 84  SFNSKEISRITFATIGSV--KNHPELFT--HFKNIIVDECHLVNPKEGMYKDFFDAVKCK 139

Query: 355 FLLGLTATPER-SDQADILSLCD----------SNLVFERNLVHGIDEKILVPFDYHGIY 403
            +LGLTATP R S   D  S+            S +++   +   +D   L   DY+ + 
Sbjct: 140 -VLGLTATPYRLSSSRDFGSMLKFITRTKPHVFSEVIYHVQVSTLLDMGYLAKLDYYSMN 198

Query: 404 DQAVNYQEIPWRNGKFDPDSLDNALATQRRAEHVYQ---HWHQK--------KQTRTLAF 452
               N  E+  +      D  D ++  +      Y    H  Q+        K+   L F
Sbjct: 199 PSGWN--ELNLKVNTTGADYTDRSVQKEYERIDFYGYLVHIVQRLMNPKAGGKRKGILVF 256

Query: 453 CVSKKHADFMAEFCLSKGIKAIAVYSDS--KVRRNQALQWLDSGKIDILFSVDLFNEGTD 510
               K A+      L+  I   A+ S    K  R   L+   +G+I ++ +V +   G D
Sbjct: 257 TRFLKEAER-----LTMSIPGCAIVSGDTPKKEREHILEAFKAGEIPVVANVGVLTTGFD 311

Query: 511 LPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGNHDSF 560
            P +DT++M RPT S  ++ Q +GR +R      K    ++D  GN   F
Sbjct: 312 YPELDTVVMARPTMSLAMWYQIVGRAIRP--HPSKECGWIVDLCGNIKRF 359