Pairwise Alignments

Query, 107 a.a., ferredoxin family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 689 a.a., Iron-sulfur cluster-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 7   DNCIQCKYTDCVAVCPADAFHEGPNFMVINPIE--CIDCGLCVPECTAQAI-FQEDELVG 63
           D C  C    CV+ CPA A  +      +  IE  C+ CGLC   C   AI  Q   L+G
Sbjct: 558 DRCTLC--LSCVSACPASALQDNTERPQLRFIEKNCVQCGLCASTCPEDAITLQPRLLLG 615

Query: 64  DQR 66
           +QR
Sbjct: 616 EQR 618



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 17  CVAVCPADAFHEG--PNFMVINPIECIDCGLCVPECTAQAI 55
           CV +C A A H     N +V+NP  C+ CG C   C   A+
Sbjct: 314 CVEICSALAIHSEIKRNQIVVNPNLCVGCGACTTVCPTGAL 354



 Score = 23.5 bits (49), Expect = 0.005
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 35  INPIECIDCGLCVPECTAQAIFQEDELVGDQRIFIELN 72
           +N   C  C  CV  C A A+  +D     Q  FIE N
Sbjct: 555 VNKDRCTLCLSCVSACPASAL--QDNTERPQLRFIEKN 590



 Score = 22.7 bits (47), Expect = 0.008
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 39  ECIDCGLCVPECTAQAIFQE 58
           E + C  CV  C+A AI  E
Sbjct: 307 ETVGCNACVEICSALAIHSE 326