Pairwise Alignments

Query, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 5/146 (3%)

Query: 115 LMIALDGVSDPGNLGTIIRVADWYGISHIIASQDCADPYNPKTISATMGSFGRVQVSQVD 174
           L++ LDGV+DP NLG  +R AD  G   +I  +D +    P       G+   + +  V 
Sbjct: 97  LLLVLDGVTDPHNLGACLRSADAAGALAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVT 156

Query: 175 ----LPDYLAKANLPVYGAFLEG-VSVHQTAFQAEGILLMGSESHGIREQAAQYVTDKIT 229
                 + L +  L V G   E  VS++        IL+MG+E  G+R    ++    + 
Sbjct: 157 NLARTLEKLQQRGLWVVGTAGEAEVSIYDQDLTGPTILIMGAEGKGMRRLTREHCDYLVH 216

Query: 230 IPAFGGAESLNVAMATGIILDNIRRQ 255
           +P  G   SLNV++ATG+ L   +RQ
Sbjct: 217 LPMAGSVSSLNVSVATGVCLFEAQRQ 242