Pairwise Alignments

Query, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Serratia liquefaciens MT49

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 116 MIALDGVSDPGNLGTIIRVADWYGISHIIASQDCADPYNPKTISATMGSFGRVQVSQVD- 174
           ++ LDGV+DP NLG  +R AD  G+  +I  +D +   N        G+   V + +V  
Sbjct: 97  LLVLDGVTDPHNLGACLRSADAAGVHAVIVPRDRSAQLNATAKKVACGAAENVPLIRVTN 156

Query: 175 ---LPDYLAKANLPVYGAFLEGV-SVHQTAFQAEGILLMGSESHGIREQAAQYVTDKITI 230
                  L + N+ + G   E   ++ Q+       L+MG+E  G+R    ++  + I+I
Sbjct: 157 LARTLRLLQEMNVWIVGTAGEADHTLFQSKMTGPMALVMGAEGEGMRRLTREHCDELISI 216

Query: 231 PAFGGAESLNVAMATGIILDNIRRQHS 257
           P  G   SLNV++ATGI L    RQ S
Sbjct: 217 PMAGTVSSLNVSVATGICLFEAVRQRS 243