Pairwise Alignments

Query, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., rRNA methylase from Agrobacterium fabrum C58

 Score =  100 bits (250), Expect = 3e-26
 Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 34/271 (12%)

Query: 9   ISDSTMISKTQLKLIRALGQKKQRKAHGLFLVQGEKNVLELTNSTLKVQHIFATAEFLAE 68
           + + T ++   +K I+AL QKK R+  G F+ +G K V++       ++ +         
Sbjct: 16  VKEVTSLANPIIKDIKALTQKKGREETGTFMAEGLKLVIDALELGWTIKTLV-------- 67

Query: 69  HAQALAGFECIEATLDDLTKVSTLVSNNAAIAVVAI-----PHIEV-------------- 109
           +A+A  G   +E           LV   +   + +I     P + V              
Sbjct: 68  YAKAAKGKPLVEQAAVKTVASGGLVLEVSEKVIASITRRDNPQMVVGIFEQKWKPLKDIR 127

Query: 110 PKAQGLMIALDGVSDPGNLGTIIRVADWYGISHIIASQDCADPYNPKTISATMGSFGRVQ 169
           P+     IALD V DPGNLGTIIR AD  G S +I   DC DP++ +T+ ATMGS     
Sbjct: 128 PEKGETYIALDRVRDPGNLGTIIRTADAAGASGVILVGDCTDPFSLETVRATMGSVFATP 187

Query: 170 VSQVDLPDYLA---KANLPVYGAFLEGVSVHQTAFQAEG---ILLMGSESHGIREQAAQY 223
           V++  + ++L+    A++ V    L G SV        G   ++LMG+E  G+  + A  
Sbjct: 188 VARASVEEFLSWKKSAHVSVVATHLAG-SVDYRKIDYAGKPVVILMGNEQSGLPPELAGK 246

Query: 224 VTDKITIPAFGGAESLNVAMATGIILDNIRR 254
                 IP  G A+SLN+A+AT ++L   RR
Sbjct: 247 ADQLARIPQQGRADSLNLAIATAVMLFEARR 277