Pairwise Alignments

Query, 296 a.a., citrate (pro-3S)-lyase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., host specificity protein from Pseudomonas simiae WCS417

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 28/282 (9%)

Query: 9   LRRSMLFVPGANAAMLSNTFIYQPDSIMFDLEDSVALREKDTAR-MLVFHALQHPMYQEM 67
           L RS LFVPG+     S       D+++ D ED+V    K  AR  L      +P  Q  
Sbjct: 5   LVRSALFVPGSRPERFSKALASGADAVIVDFEDAVEEPLKRQARDNLGAFLTANPAAQVW 64

Query: 68  ETVVRVNPLDSEFGIKDLNAVVRGGAKV--VRLPKTDNANDVIEMEKVIEQIERACGREV 125
              VR+N  +     +D+ A  +    V  V LPK ++A+ V         +  A G+ +
Sbjct: 65  ---VRINAPEHAEHFEDV-AFCKAHPTVAGVLLPKVESASQVA--------VVAATGKVI 112

Query: 126 GSTRMLAAIESAQGINNAVEIAFSSRRLIGIALGAEDYVRDLRTQRSAEGIELLF--ARC 183
                   IESA+G+    EIA + + +  ++ G  D   DL    ++   +     AR 
Sbjct: 113 WPI-----IESARGLLAVAEIAHAPQ-VERLSFGGLDLALDLNLSSNSPAAQFALDQARL 166

Query: 184 SILQAARAAGIMA-FDTVYSDANNEEGFLREAEHIKQLGFDGKSLINPRQIDLLHNVFAP 242
           +++  +RAAG++A  D V+   ++ EG  R   H  ++GF G   I+P+Q+ ++H   AP
Sbjct: 167 ALIVHSRAAGLVAPLDGVHPAIDDPEGLRRSIRHAYEMGFAGALCIHPKQVAVIHQALAP 226

Query: 243 TQKEVDHAIAVIEAAEEAAAKGLGVVSLNGKMVDGPIIERAR 284
           + +++  A  V+    +A A G G   ++G+MVD P++ RA+
Sbjct: 227 SAEDLAWARRVV----DAGAHGAGAYQIDGQMVDAPVLLRAQ 264