Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 58.5 bits (140), Expect = 7e-13
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 444 LAAVLGNLLDNAFEATLKNPHSNKTISLLLTD--NGAELVIEVADNGIGISADIAQTLF- 500
           L  VL NL+DNA + T   P     +++   +  +G    IEV D+GIGI AD  + +F 
Sbjct: 343 LRRVLANLVDNAVKFT---PRGRVLLAVRTRERESGRAWRIEVRDSGIGIPADAQERVFN 399

Query: 501 ----LKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNRPKTLAAE 556
               +  V    Q GHG+GL +V +   Q    + + SA  +G++FS  +P  P+  A  
Sbjct: 400 DFEQIGNVERNLQRGHGLGLAIVRRLAAQLGIEVALRSAPGRGSVFSFELPAAPEGAAVA 459

Query: 557 NLPALAE 563
            +  L +
Sbjct: 460 RIRPLPQ 466



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 447 VLGNLLDNAFEATLKNPHSNKTISLLLTD-------NGAELVIEVADNGIGISA 493
           ++G  L +AF  +   P +   I+LLL          GA  ++ VA  GIG++A
Sbjct: 134 LMGMTLSSAFSVSFYTPATQLAITLLLAPVIVTGLWMGAPEMVAVAVIGIGLTA 187