Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

 Score = 48.9 bits (115), Expect = 6e-10
 Identities = 87/388 (22%), Positives = 152/388 (39%), Gaps = 65/388 (16%)

Query: 218 EIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILGIAHQPTHLIGRNVQEFITP 277
           ++A  L  ++++  SV  G+ A  L+G I  VN     ++G +  P  L+  N +    P
Sbjct: 301 DLADALAFRKAMEDSVITGLRARDLQGRITYVNPAFCEMVGFS--PEELMAGNAEAPDAP 358

Query: 278 TCFFMGASPFGKLAQQN-------RVSQQDELISCNGE---TLVANRVPINSGQQQIGWV 327
                 A  + +   +        R   +   +  +G     L+     IN+ + Q GW+
Sbjct: 359 YWPTELAHEYQQRQARRLAGGMPPREGFESVFMRKDGTRFPVLIFEAPLINAHKVQTGWM 418

Query: 328 VSF------RRRNDFNTLTSQLTQIRQH----NDNLRVMSHEFANRLSTI-----GGLIQ 372
            +F      RR  + +  + +  Q         +   ++SHE    L+ I     G L  
Sbjct: 419 SAFIDVSEQRRIEELSRASQERLQASARLATVGEMASLLSHELTQPLAAIASYASGSLNL 478

Query: 373 IGAY-----DEAVKTIRRETAEQQQLIDFIAQTFH--------------PKVIAGLLLGK 413
           +G +      E    +RR  AEQ      + ++ H              P+ +   +L  
Sbjct: 479 LGPHARGDQGEVAMAVRR-IAEQADRAGQVIRSVHDFVRRRDRTREPVAPQALIDAVLPL 537

Query: 414 YS-RAKELGLCLEFDPLSHLHQEPQCMTSDELAA-VLGNLLDNAFEATLKNPHSNKTISL 471
              +A++LG+ +E      L   P  M    L   VL NL  NA +A     +    +  
Sbjct: 538 VRLQARKLGVIIEVVFEDRL---PAAMCDRTLVEQVLLNLARNAMQAMDSPDNVGSRVLR 594

Query: 472 LLTDNGAE------------LVIEVADNGIGISADIAQTLFLKGVSSKNQEGHGIGLYLV 519
           L     A             L   VAD G GIS ++A+ LF    +++  +G G+GL L 
Sbjct: 595 LRVARAAAVGGTVQEDGRRWLEFSVADLGCGISDEVAERLFTPFFTTR-ADGMGLGLSLC 653

Query: 520 HQFVTQAHGSILIDSAEPQGTIFSIFIP 547
              V Q  G+++ +  +P+GT+F   +P
Sbjct: 654 RTVVEQHGGALVFEPNKPRGTVFRFTLP 681