Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  304 bits (779), Expect = 5e-87
 Identities = 191/544 (35%), Positives = 309/544 (56%), Gaps = 20/544 (3%)

Query: 13  VCQTLSFQQRVGALLVAMVVIQLSLVAGFFHQTLSETLQDQISTKALIQAREIATDPNLI 72
           V  +++F++R+  ++    +I+L L+       +  + + ++  KAL  A  +A  P +I
Sbjct: 2   VWSSITFRKRMLIIMTLSGLIELLLLVAAGFMYVKHSQEQEVGQKALGVAAFLAQTPAVI 61

Query: 73  VLIQQNRLAEVQAKIDR-LQRISDANFIVIGDANGIRIAHPDEQKIGLPMQGGDSRRALK 131
            +I+  R ++ Q +  R L ++  A FIVIGD  GIR+ HP +++IG PM GGD+ RAL 
Sbjct: 62  NMIKTGRASDDQQQSYRELTQLIGAAFIVIGDNQGIRLVHPIDERIGKPMVGGDNERALV 121

Query: 132 EGEYYTSTQKGSLGWAIRGKAAIVAPSGEILGVVSVGYLLDNISSWLRVYSYPVIFTVLL 191
           EGE Y S  +GSLG ++RGKAA+V   G+I+GVVSVGYL++ +   +  + + +I T LL
Sbjct: 122 EGEAYVSFAQGSLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATALL 181

Query: 192 LMLLSALGAWIFTRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNA 251
           ++  +AL +   +R  ++ +   EPEEIA         + ++ EGI++I  KG + S+N 
Sbjct: 182 VVGANALVSSYASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSINK 241

Query: 252 KALNILGIAHQPTHLIGRNVQEFITPTCFFMGASPFGKLAQQNRVSQQDELISCNGETLV 311
            A  ILG+  +    + R +   +  +  +        +    R     EL   N   ++
Sbjct: 242 SACEILGLRREQA--LNRRLTTILPESDLYT-------VLATGRTDHDIELY-LNKHWII 291

Query: 312 ANRVPINSGQQQIGWVVSFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFANRLSTIGGLI 371
           ANR PI    + +G V SFR R++ N LT QL Q R++ + LR  +HE  N+L+TI GL+
Sbjct: 292 ANRSPIVVEGKVVGAVSSFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLL 351

Query: 372 QIGAYDEAVKTIRRETAEQQQLIDFIAQTFHPKVIAGLLLGKYSRAKELGLCLEFDPLSH 431
           Q+G  D   + I +ET   Q LI+F+ +T    +IAG+LLGK  RA+ELGL L  +  + 
Sbjct: 352 QMGELDAVQQLIGQETEHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGAR 411

Query: 432 LHQEPQCMTSDELAAVLGNLLDNAFEATLKN-------PHSNKTISLLLTDNGAELVIEV 484
           L   P  + ++++  +LGNL+DNAFEATL         P   + I + ++D G E+++EV
Sbjct: 412 LETLPIHIKAEDVVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEV 471

Query: 485 ADNGIGISADIAQ-TLFLKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFS 543
            D G G+  ++    L  KGVSSK  +  G+GL+LV Q   +  G + + S + QGT  +
Sbjct: 472 DDQGCGLPKELEHWQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHS-KAQGTRMT 530

Query: 544 IFIP 547
           +++P
Sbjct: 531 VYLP 534