Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., PAS domain-containing sensor histidine kinase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 83/362 (22%), Positives = 152/362 (41%), Gaps = 51/362 (14%)

Query: 225 LQQSILQSVYEGIVAISLKGEILSVNAKALNILGIAHQPTHLIGRNVQEFITPTCFFMGA 284
           L + +  +  + +  I++ G   +VN     +L    +   L+G   Q FI P  +    
Sbjct: 19  LNRLLFNNYPDAVYTITMDGIFHTVNDTVCELL--QKEQKELVGEGFQLFIHPEYWEEVV 76

Query: 285 SPFGKLAQQNRVSQQDELISCNGETLV---ANRVPINSGQQQIGWV-----VSFRRRNDF 336
             F K A+Q    +   ++  +    V       P+ +G Q +G       ++ ++  + 
Sbjct: 77  HHF-KAAKQGLPQRYQTVVRNSSGVSVFLDITNFPLKAGDQMVGIFGIAKDITAQKERER 135

Query: 337 NTLTSQLTQIRQHNDNL----RVMSHEFANRLSTIGGLIQIGAYDEAVK----TIRRETA 388
             L +    IRQ N+ L    ++++H+F + ++ + GL ++   D   +    T      
Sbjct: 136 ALLHTSQELIRQ-NEELELFRKIIAHDFRSPIARLIGLSKLLQKDNLPQKTQATAIGSLL 194

Query: 389 EQQQLIDFIAQTFHPKVIAGLLLGKYSRAKELG-LCLEFDPL----SHLHQEP------- 436
           +  Q +D + +  +       +L    +  E G LC   D L    + L QE        
Sbjct: 195 QSAQQLDGMVRDLNQ------MLALRQQGDETGELCHVEDLLQVCLASLQQEISAAGATI 248

Query: 437 --------QCMTSDE-LAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADN 487
                   Q  T+   L ++L NLL NA +   ++P     +++ L     E VI VADN
Sbjct: 249 TIARQADLQLFTAKAYLTSILQNLLSNALK--YRDPERPLQVTVTLKQQNGEAVIAVADN 306

Query: 488 GIGISAD-IAQTLFLKGVSSKNQ-EGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIF 545
           G G+  D ++  LF       ++ EG G+GLYLV + V    G + ++S    GT F++ 
Sbjct: 307 GRGMDLDKVSNDLFKMYKRFHSEVEGKGLGLYLVKEQVRLLQGKVEVESTPAVGTTFTVT 366

Query: 546 IP 547
           +P
Sbjct: 367 LP 368