Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score = 58.9 bits (141), Expect = 6e-13
 Identities = 99/440 (22%), Positives = 173/440 (39%), Gaps = 67/440 (15%)

Query: 157 PSGEILGVVSVGYLLDNISSWLRVYSYPVIFTVLLLMLLSALGAWIFTRHIKQQMFNMEP 216
           P G  L +V++ Y  D     LR      IF   +L +LS    W   RH+++++     
Sbjct: 230 PPGHGLELVAISYHSD--PQLLRNVLAAAIF---ILSILSVSSLWALRRHVRRRL--AAE 282

Query: 217 EEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILGIAHQPTHLIGRNVQEFI- 275
           + +    + ++++  S+  G+ A  L+G I  VN              H++G    E + 
Sbjct: 283 QALRTEHSFRKAMEDSLTVGMRARDLEGRITYVNPAFC----------HMVGWTADELVG 332

Query: 276 -TPTCFFMGASPFGKLAQQNRVSQQDELIS---------CNGE---TLVANRVPINSGQQ 322
             P   +          + +R   + E  +          NGE    L+     I+S  +
Sbjct: 333 TVPPMLYWVPEDLEHTYELHRAVMRGEAPAEGFELVFRRKNGERFSALIYEAPLIDSDGR 392

Query: 323 QIGWVVS---FRRRNDFNTLTSQLTQIRQHNDNLRVM-------SHEFANRLSTI----- 367
             GW+ S      R     L+ Q  +  QH   L  M       +HE    LS I     
Sbjct: 393 HTGWMASVLDITERKRAEELSRQHQEKLQHTARLITMGEMASTLAHELNQPLSAIASYAT 452

Query: 368 GGLIQIGAYD----EAVKTIRRETAEQQQ-------LIDFIAQT-------FHPKVIAGL 409
           G L ++ A D    E V  + +  A+ Q+       + DF+ ++          ++I G+
Sbjct: 453 GCLNRLSAGDARPEELVPPLTKLGAQAQRAGQIIRRIHDFVRKSEPLVVPCLLDEIIEGV 512

Query: 410 LLGKYSRAKELGLCLEFD-PLSHLHQEPQCMTSDELAA-VLGNLLDNAFEATLKNPHSNK 467
           +      A++ G+ ++ D  L+     P+      L   V+ NL+ NA EA    P   +
Sbjct: 513 VGFLEPDARKRGIRIDLDLSLTPGAARPRVEADHILIEQVILNLVRNAMEAMGHTPRPQR 572

Query: 468 TISLLLTDNGAELVIEVADNGIGISADIAQTLFLKGVSSKNQEGHGIGLYLVHQFVTQAH 527
            +++ L     +  I VAD G GI  +IA  LF    ++K + G G+GL +    V    
Sbjct: 573 RLTISLQCADGQARIRVADRGTGIPPEIAANLFSPFFTTK-ETGMGMGLNICRSIVEAHR 631

Query: 528 GSILIDSAEPQGTIFSIFIP 547
           G +  +     G++F   +P
Sbjct: 632 GHLWFEENPGGGSVFLFTLP 651