Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Sensor protein of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 55.8 bits (133), Expect = 4e-12
 Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 33/215 (15%)

Query: 356 MSHEFANRLSTIGGLIQI--------GAYDEAVKTIRRETAEQQQLIDFIAQTFHPKVIA 407
           ++HE  N LS+I GL +         G   E  + + +E     +++  + +   P  + 
Sbjct: 254 VAHEIRNPLSSIKGLAKYFAERTPAGGESHELAQVMAKEADRLNRVVSELLELVKPAHLT 313

Query: 408 GL-------------LLGKYSRAKELGLCLEF-DPLSHLHQEPQCMTSDELAAVLGNLLD 453
                          L+ + ++++E+ L     + L  +  +P     D L  VL NL  
Sbjct: 314 LQTVNLNDIITHSLNLVSQDAQSREIQLRFTANETLKRIQADP-----DRLTQVLLNLYL 368

Query: 454 NAFEATLKNPHSNKTISLLLTDNGAE-LVIEVADNGIGISADIAQTLFLKGVSSKNQEGH 512
           NA  A  +      TIS+   ++G + ++I V D+G GI+ D  + +F    ++K  +G 
Sbjct: 369 NAIHAIGRQG----TISVEAKESGTDRVIITVTDSGKGIAPDQLEAIFTPYFTTK-ADGT 423

Query: 513 GIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIP 547
           G+GL +V   + Q  G+I + S E +G +F+I++P
Sbjct: 424 GLGLAVVQNIIEQHGGAIKVKSIEGKGAVFTIWLP 458