Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Fumarate respiration sensor kinase protein DcuS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  196 bits (498), Expect = 2e-54
 Identities = 156/546 (28%), Positives = 260/546 (47%), Gaps = 21/546 (3%)

Query: 10  HTKVCQTLSFQ-QRVGALLVAMVVIQLSLVAGFFH----QTLSETLQDQISTKALIQARE 64
           H+  C+ L  +  ++G  ++ MV   L  V    H      +S   +D ++ KAL  AR 
Sbjct: 3   HSLPCRALRKRPMKLGTTVILMVSAVLFSVLVVVHLIYFSQISSMTRDALADKALAVARS 62

Query: 65  IATDPNLIVLIQQNRLAE-VQAKIDRLQRISDANFIVIGDANGIRIAHPDEQKIGLPMQG 123
           +A  P +   +++      +Q   + + + +   FIV+ +  GIR +HP+ Q+IG P +G
Sbjct: 63  LADSPAVREGLKKPPAESGIQTLAEAVSQHNGFLFIVVTNMQGIRYSHPETQRIGQPFKG 122

Query: 124 GDSRRALKEGEYYTSTQKGSLGWAIRGKAAIVAPSGEILGVVSVGYLLDNISSWLRVYSY 183
            D   AL +G+   +  +G L  A+R    +       +GVV++G  L +++  +     
Sbjct: 123 DDILLAL-QGKENVAINRGFLAKALRVFTPVYDEHHRQIGVVAIGLELSHVTQQINNSRG 181

Query: 184 PVIFTVLLLMLLSALGAWIFTRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLK 243
            +I+++L   L+  LG +   + +K+ +F +EP EI+     +Q++LQS+ EG++A+   
Sbjct: 182 SIIWSILFGALVGLLGTYALVKVLKRILFGLEPYEISTLFEQRQAMLQSIKEGVIAVDDS 241

Query: 244 GEILSVNAKALNILGIAHQPTHLIGRNVQEFITPTCFFMGASPFGKLAQQNR--VSQQDE 301
           GE+  +N  A  +L           R  Q+    +      S    +++  R    ++DE
Sbjct: 242 GEVTLINHAAQALLDY---------RKTQDDARLSTLSHAWSQVVDISEVLRDGTPRRDE 292

Query: 302 LISCNGETLVANRVPINSGQQQIGWVVSFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFA 361
            I   G  L+ N VP+ S  + IG + +FR + +   L  +L  +  + D LR  SHEF 
Sbjct: 293 EIIVKGRLLLVNTVPVRSNGEIIGAISTFRDKTEVRQLMQRLDGMVNYADALRERSHEFM 352

Query: 362 NRLSTIGGLIQIGAYDEAVKTIRRETAEQQQLIDFIAQTFHPKVIAGLLLGKYSRAKELG 421
           N+L  I GL+ + +Y +    I +     Q+ I  +       +IAG LL K +RA + G
Sbjct: 353 NKLHVILGLLHLKSYKQLEAYIIKTANNYQEEIGLLLGKIKSPIIAGFLLSKITRASDFG 412

Query: 422 LCLEFDPLSHLHQEPQCMTSDELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELV 481
             L     S L           L   LGNL++NA EA   +  S   IS+ L      L 
Sbjct: 413 HSLVISSDSQLPDNNNEDQVTVLITALGNLIENALEAL--SQESGGEISVSLHYRHGWLH 470

Query: 482 IEVADNGIGISADIAQTLFLKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTI 541
            EV+D+G GI  +  + +F KGVSSK  E  G+GL LV Q V    G I ++S     T 
Sbjct: 471 CEVSDDGPGIEPERIEAIFEKGVSSKGAE-RGVGLALVKQQVEALGGVISVESEPGIFTQ 529

Query: 542 FSIFIP 547
           F + +P
Sbjct: 530 FFVQLP 535