Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration (NCBI) from Escherichia coli BW25113

 Score =  215 bits (548), Expect = 3e-60
 Identities = 160/527 (30%), Positives = 271/527 (51%), Gaps = 19/527 (3%)

Query: 26  LLVAMVVIQLSLVAGFFH-QTLSETLQDQISTKALIQAREIATDPNLIVLIQQN-RLAEV 83
           L+V+ V+  + LV    +   +S+  +D ++ KAL  AR +A  P +   +Q+  + + +
Sbjct: 23  LMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGI 82

Query: 84  QAKIDRLQRISDANFIVIGDANGIRIAHPDEQKIGLPMQGGDSRRALKEGEYYTSTQKGS 143
           QA  + +++ +D  FIV+ D   +R +HP+ Q+IG P +G D  +AL  GE   +  +G 
Sbjct: 83  QAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKALN-GEENVAINRGF 141

Query: 144 LGWAIRGKAAIVAPSGEILGVVSVGYLLDNISSWLRVYSYPVIFTVLLLMLLSALGAWIF 203
           L  A+R    I   + + +GVV++G  L  ++  +    + +I++VL  ML+  +G  I 
Sbjct: 142 LAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCIL 201

Query: 204 TRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILGIAHQP 263
            + +K+ +F +EP EI+     +Q++LQS+ EG+VA+  +GE+  +N  A  +L      
Sbjct: 202 VKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELL------ 255

Query: 264 THLIGRNVQEFITPTCFFMGASPFGKLAQQNRVSQQDELISCNGETLVANRVPINSGQQQ 323
            +   ++ ++  T +  +       ++ +     ++DE I+     L+ N VP+ S    
Sbjct: 256 NYRKSQDDEKLSTLSHSWSQVVDVSEVLRDG-TPRRDEEITIKDRLLLINTVPVRSNGVI 314

Query: 324 IGWVVSFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFANRLSTIGGLIQIGAYDEAVKTI 383
           IG + +FR + +   L  +L  +  + D LR  SHEF N+L  I GL+ + +Y +    I
Sbjct: 315 IGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYI 374

Query: 384 RRETAEQQQLIDFIAQTFHPKVIAGLLLGKYSRAKELGLCLEFDPLSHLHQEPQCMTSDE 443
            +     Q+ I  +       VIAG L+ K +RA +LG  L  +  S L   P   + D+
Sbjct: 375 LKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSESQL---PDSGSEDQ 431

Query: 444 LAAV---LGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLF 500
           +A +   LGNL++NA EA    P     IS+ L      L  EV D+G GI+ D    +F
Sbjct: 432 VATLITTLGNLIENALEAL--GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIF 489

Query: 501 LKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIP 547
            KGVS+K  E  G+GL LV Q V    GSI ++S     T F + IP
Sbjct: 490 DKGVSTKGSE-RGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIP 535