Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., sensory histidine kinase in two-component regulatory system with ZraR (NCBI) from Escherichia coli BW25113

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 32/214 (14%)

Query: 356 MSHEFANRLSTIGGLIQI--------GAYDEAVKTIRRETAEQQQLIDFIAQTFHPKVIA 407
           ++HE  N LS+I GL +         G   +  + + +E     +++  + +   P  +A
Sbjct: 252 VAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHLA 311

Query: 408 GL-------------LLGKYSRAKELGLCLEF-DPLSHLHQEPQCMTSDELAAVLGNLLD 453
                          L+ + + ++E+ L     D L  +  +P     D L  VL NL  
Sbjct: 312 LQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADP-----DRLTQVLLNLYL 366

Query: 454 NAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLFLKGVSSKNQEGHG 513
           NA +A       +  IS+  +++GA + I V D+G GI+AD    +F    ++K  EG G
Sbjct: 367 NAIQAI----GQHGVISVTASESGAGVKISVTDSGKGIAADQLDAIFTPYFTTK-AEGTG 421

Query: 514 IGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIP 547
           +GL +VH  V Q  G+I + S E +G+ F++++P
Sbjct: 422 LGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLP 455



 Score = 28.5 bits (62), Expect = 6e-04
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 84  QAKIDRLQRISDANFIVIGDANGIRIAHPDEQKIGLPMQGGDSRRALKEGE 134
           QA ++ +       +  + DA GI I H D  K+G  +   D  + LK  E
Sbjct: 78  QALLEEMAGQPGVLWFAVTDAQGIIILHSDPDKVGRALYSPDEMQKLKPEE 128