Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., sensory histidine kinase in two-component regulatory system with citB (NCBI) from Escherichia coli BW25113

 Score =  379 bits (973), Expect = e-109
 Identities = 208/539 (38%), Positives = 330/539 (61%), Gaps = 20/539 (3%)

Query: 15  QTLSFQQRVGALLVAMVVIQLSLVAGFFHQTLSETLQDQISTKALIQAREIATDPNLIVL 74
           Q L+F  R+  L++   +  ++ +A +F  +  + L   +   A+ QA+ IA++ ++I  
Sbjct: 14  QRLAFPLRIFLLILVFSIFVIAALAQYFTASFEDYLTLHVRDMAMNQAKIIASNDSVISA 73

Query: 75  IQQNRLAEVQAKIDRLQRISDANFIVIGDANGIRIAHPDEQKIGLPMQGGDSRRALKEGE 134
           ++      +    ++LQR +D +++VIGD + IR+ HP+ +KIG PMQ    + AL++GE
Sbjct: 74  VKTRDYKRLATIANKLQRDTDFDYVVIGDRHSIRLYHPNPEKIGYPMQF-TKQGALEKGE 132

Query: 135 YYTSTQKGSLGWAIRGKAAIVAPSGEILGVVSVGYLLDNISSWLRVYSYPV--IFTVLL- 191
            Y  T KGS+G A+R K  I    G+++GVVS+GYL+  I SW   +  P+  +F VLL 
Sbjct: 133 SYFITGKGSMGMAMRAKTPIFDDDGKVIGVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLG 192

Query: 192 -LMLLSALGAWIFTRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLKGEILSVN 250
            LMLLS    W    HI++QM  MEP++IA  +  Q+++  SVYEG++A+   G I ++N
Sbjct: 193 ILMLLS----WFLAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDPHGYITAIN 248

Query: 251 AKALNILGIAHQPTHLIGRNVQEFITPTCFFMGASPFGKLAQQNRVSQQDELISCNGETL 310
             A  +LG++      +G+ + E + P  FF          +Q    +QD + + NG ++
Sbjct: 249 RNARKMLGLSSPGRQWLGKPIVEVVRPADFF---------TEQIDEKRQDVVANFNGLSV 299

Query: 311 VANRVPINSGQQQIGWVVSFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFANRLSTIGGL 370
           +ANR  I SG   +G ++SFR +++ +TL +QLTQI+Q+ ++LR + HE  N +ST+ GL
Sbjct: 300 IANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGL 359

Query: 371 IQIGAYDEAVKTIRRETAEQQQLIDFIAQTFHPKVIAGLLLGKYSRAKELGLCLEFDPLS 430
           +Q+  YD  +  ++ E+  QQQLID + + F  + +AGLL GK  RA+ELGL +   P S
Sbjct: 360 LQMKEYDRVLAMVQGESQAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMIIVPGS 419

Query: 431 HLHQEPQCMTSDELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIG 490
            L Q P  + S E AA++GNLLDNAFEA+L++   NK + L L+D G ++VIEVAD G G
Sbjct: 420 QLSQLPPGLDSTEFAAIVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCG 479

Query: 491 ISADIAQTLFLKGVSSKNQE--GHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIP 547
           +   +   +F +GVS++  E   HGIGLYL+  +VT+  G I ++  +P GT+FSI+IP
Sbjct: 480 VPESLRDKIFEQGVSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIP 538