Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., two-component system sensor histidine kinase DcuS from Dickeya dadantii 3937

 Score =  198 bits (504), Expect = 4e-55
 Identities = 152/529 (28%), Positives = 262/529 (49%), Gaps = 22/529 (4%)

Query: 23  VGALLVAMVVIQLSLVAGFFHQTLSETLQDQISTKALIQAREIATDPNLIVLIQQNRLAE 82
           V A++ +++++  +L+  FF   ++E  +  +  KA   AR +A  P  IV+     + +
Sbjct: 18  VSAVIGSVLLVVYALL--FFR--ITELTETHLKDKAFAIARTVANSP--IVVDDLKGIGD 71

Query: 83  ---VQAKIDRLQRISDANFIVIGDANGIRIAHPDEQKIGLPMQGGDSRRALKEGEYYTST 139
              VQ   + ++  +   F+++ D +GIR +HP+  +IG    G D   AL  G   T+ 
Sbjct: 72  PMLVQRFSEDVKSRNHLLFVIVTDMDGIRHSHPEPGQIGRHFIGDDLYPALL-GLENTAV 130

Query: 140 QKGSLGWAIRGKAAIVAPSGEILGVVSVGYLLDNISSWLRVYSYPVIFTVLLLMLLSALG 199
            +G L  A+R    +   + + LGVV+VG  L ++ S +    + + +T+L   L+  LG
Sbjct: 131 NRGVLDPALRVFTPVFDKNNQQLGVVAVGISLSSVQSVINENRWIIPWTILFGALVGLLG 190

Query: 200 AWIFTRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILGI 259
            +   + +K+ M   EP EI+     + ++L+ + EG++A+     +  +N +A  +   
Sbjct: 191 TYFLVKTLKRIMLGFEPFEISNLFEQRNAMLKQIKEGVIAVDTDLRVTIINDEAKRLFSQ 250

Query: 260 -AHQPTHLIGRNVQEFITPTCFFMGASPFGKLAQQNRVSQQDELISCNGETLVANRVPIN 318
                T  IG  +  +  P    +      +   +    +QDE I+ NG  L+ N VP+ 
Sbjct: 251 HGSGETLAIGSTISRW--PALMNL------EKVLETGAPRQDEEINFNGNLLLINTVPVV 302

Query: 319 SGQQQIGWVVSFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFANRLSTIGGLIQIGAYDE 378
                IG + +FR + + + L  +LT +  + D LR  SHEF N+L  I G++ +  Y +
Sbjct: 303 VKGDIIGTIATFRDKTEVSQLLQRLTGMSYYADALRAQSHEFMNKLHVILGMLHLKYYPQ 362

Query: 379 AVKTIRRETAEQQQLIDFIAQTFHPKVIAGLLLGKYSRAKELGLCLEFDPLSHLHQEPQC 438
             + I +     Q  I  I +     VIAG LLGK +RA++LG+ L     S L      
Sbjct: 363 LEEYILKTANNYQAEIGSIIRKVKSPVIAGFLLGKINRARDLGVTLSISEDSLLPDTDDA 422

Query: 439 MTSDELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQT 498
             ++EL  VLGNL++NA +A   +   N+ IS+       +L   V+D+G GI+ DI Q 
Sbjct: 423 QATNELITVLGNLIENAMDAL--SGLENREISVTFHHQDGQLHCTVSDDGPGIAPDIQQR 480

Query: 499 LFLKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIP 547
           ++ +G S+K   G GIGLYL  Q + +  G+I  +S     T F + IP
Sbjct: 481 IYQEGFSTKG-SGRGIGLYLTRQSLEKIGGTIDFESEPDVYTQFFVNIP 528