Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., PAS domain-containing protein from Phocaeicola dorei CL03T12C01

 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 77/348 (22%), Positives = 150/348 (43%), Gaps = 46/348 (13%)

Query: 224 NLQQSILQSVYEGIVAISLKGEILSVNAKALNILGIAHQPTHLIGRNVQEFITPTCFFMG 283
           N   S+L+ V  G++A + +  ++ VN  AL +LG+  +P   + +  +++     F   
Sbjct: 114 NFYYSLLEEVPNGVLAWNSEKRVIFVNGAALRLLGV--EPIIFLRQLEEQYPALKDFIAH 171

Query: 284 ASPFGKLAQQNRVSQQDEL----ISCNGETLVANRVPINSGQQQIGWVVSFRRRNDFNTL 339
            +       Q+   +Q  L    +  N ET+    +   S +      +S +    ++ L
Sbjct: 172 GNVEDSFLLQSNSKKQLSLSMNRMKLNSETITLLAIKDISNE------LSEKESESWSKL 225

Query: 340 TSQLTQIRQHNDNLRVMSHEFANRLSTIGGLIQI-----GAYDEAVKTIRRETAEQQQLI 394
           T             RV++HE  N ++ I  L Q      G  ++ ++ +     + ++L+
Sbjct: 226 T-------------RVLTHEIMNTIAPIVSLSQTLSLRPGTDEKVIRGLGVIREQSERLM 272

Query: 395 DFIAQTFHPKVIAGLLLGKYSRAKEL---GLCLEFD-PLSHLHQEPQCMTSD-------- 442
           +F         +      ++S    L   GL L+ D   +H+H   +   SD        
Sbjct: 273 EFTESYRRLSYMPEPKKKRFSLTDSLHNLGLLLQSDFENAHIHFILRSTPSDIYIEGDEK 332

Query: 443 ELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLFLK 502
           +L+ V  NLL N+ ++          ++L +TD   +L I++ DNG GI  ++ + +F+ 
Sbjct: 333 QLSQVFLNLLKNSMQSLEGKTDGQIEVTLEVTD---KLYIKLLDNGRGIPMELQEKIFVP 389

Query: 503 GVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNRP 550
             ++K  EG GIGL L  Q + +  G++ +  +    T+F I  P  P
Sbjct: 390 FFTTKT-EGTGIGLSLCRQIIKRHGGNLYLQESGQGRTLFVIEWPIVP 436