Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score = 55.8 bits (133), Expect = 1e-11
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 12/132 (9%)

Query: 435 EPQCMTSDELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISAD 494
           EP  +  D    ++ NL+ NAF+ TL        +++ +   G   V+ V D G+GI A+
Sbjct: 460 EPVWIDRDLWEKIVLNLISNAFKYTLSGG-----VAVAVQPVGERAVLTVRDTGVGIPAE 514

Query: 495 IAQTLF-----LKGVSSKNQEGHGIGLYLVHQFVTQAH-GSILIDSAEPQGTIFSIFIPN 548
               +F     ++G S +  EG GIGL LV   +TQ H G++ +DS   +G+ F++ +P 
Sbjct: 515 EQPRVFDRFHRIEGQSGRTHEGTGIGLALVKD-LTQLHGGTVALDSDVGRGSTFTVTLPF 573

Query: 549 RPKTLAAENLPA 560
               + A   PA
Sbjct: 574 GNAHVPATERPA 585



 Score = 46.6 bits (109), Expect = 6e-09
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 476  NGAELVIEVADNGIGISADIAQTLFLKGVSSKNQ-EGHGIGLYLVHQFVTQAHGSILIDS 534
            +G  L + V D+G GI+ D    +F    ++K   +G G+GL  V+ F  Q+ G+  ++S
Sbjct: 1060 SGEFLKVFVRDSGRGIAPDALGRVFEPFFTTKAVGKGTGLGLAQVYGFCRQSGGTATVES 1119

Query: 535  AEPQGTIFSIFIPNRPKTLAAE 556
             E +GT+ S+ +P    T+A+E
Sbjct: 1120 VEGKGTVVSLLLPRAEATVASE 1141