Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 728 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 34/239 (14%)

Query: 348 QHNDNLRVMSHEFANRLSTIGGLIQIGAYDEAVKTIRRETAEQQQ---------LIDFIA 398
           Q+ + L+++SHEF   +S I   +++    E  +T   + AEQ           L D + 
Sbjct: 244 QNKEFLQLISHEFRAPISAIISALELIPNMEEQRTRLIQQAEQSSYRLLNLTNNLTDVLT 303

Query: 399 QT------FHPKVIAGLL---LGKYS-RAKELGLCLEFDPLSHLHQEPQCMTSDELAA-- 446
                   F    +  LL   +  +S R K+  +  EF+ +   H  P    +D +A   
Sbjct: 304 NNTEDDLHFSDVDLISLLDECISPFSVRVKDKKI--EFN-MHCSHSVPHYAETDPVALSK 360

Query: 447 VLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTL---FLKG 503
           V+ N+LDNA + T  N   + T++ L+ + G  LVI ++D GIGI     + +   F +G
Sbjct: 361 VVVNILDNAVKFT-SNGLIDVTVTTLVKNQGIFLVIIISDTGIGIDEATQKRMFERFYRG 419

Query: 504 VSSKNQE--GHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNRPKTLAAENLPA 560
             S  Q   G GIGL +  + V +  G++ + S    GT F I +P +P     E+LPA
Sbjct: 420 EHSTGQRFPGAGIGLSVAKRSVDKLGGALQVTSTVGVGTEFKILLPLKP----IEDLPA 474