Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 881 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 95/410 (23%), Positives = 161/410 (39%), Gaps = 77/410 (18%)

Query: 201 WIFTRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILGI- 259
           W+F    +Q    M    +   + +Q   +  + EG+      G I   N     + G+ 
Sbjct: 495 WVFENLTEQVDLQMRYNTL---VKVQGETIDHLAEGVAVFGADGRIRLSNPAFRALWGVT 551

Query: 260 ---AHQPTHLIGRNV---QEFITPTCFFMGASPFGKLAQQNRVSQQDELISCNGETLVAN 313
              A   TH+        Q +  P  +    S F       R S+Q  L   +G  L   
Sbjct: 552 ADEAETGTHIRAIETACAQSYDGPDGW-RAFSQFITSFDDERPSRQGTLELLSGLVLDYA 610

Query: 314 RVPINSGQQQIGWVV---------SFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFANRL 364
            +P+   Q  + +V          + + +ND      +L      ND ++ +S+E  + L
Sbjct: 611 IIPLPDAQTMLTFVNMTDSVRAERALKEKNDALLKADELK-----NDFVQHVSYELRSPL 665

Query: 365 STIGGLIQIGAYDEAVKT--IRRETAEQQQLIDFIAQTFH------------PKVIAGLL 410
           + I G      + + +KT  I + T  Q + +D I+ +                V AG++
Sbjct: 666 TNIIG------FTDLLKTPGIGQLTERQAEYLDHISTSSSVLLTIVNDILDLATVDAGIM 719

Query: 411 LGKYS-----------------RAKELGLCLEFDPLSHLHQEPQCMTSDE--LAAVLGNL 451
              YS                 R +E G+ LE    +HL      + +D   L  +L  L
Sbjct: 720 QLNYSDNDLNELLDDVSVQIADRLQESGISLEIVAPAHLGS----LVADHQRLKQILIKL 775

Query: 452 LDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLFLKGVSSKN--- 508
           L NA     +      ++ L    +  + V  VAD G GI  D+ +++F +  +  N   
Sbjct: 776 LTNAINFAPEG----SSVQLSCQRSEGDFVFSVADKGPGIPEDMLKSVFDRFATRGNGGR 831

Query: 509 QEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNR--PKTLAAE 556
           + G G+GL +V  FV+  HG++ IDS    GTI +  IP+   P ++AAE
Sbjct: 832 RTGAGLGLSIVESFVSLHHGTVSIDSRPGNGTIVTCRIPSATLPHSIAAE 881