Pairwise Alignments

Query, 227 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., DNA-binding transcriptional regulator NtrC from Methylophilus sp. DMC18

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 4/161 (2%)

Query: 6   DVLIVEDETSIADVHSFYLKQTARFRPVGVAQSINEARNMVRILKPKLIFLDNYLPDGRG 65
           ++L+V+DE  I ++ S  L+       V +A++   AR+     +P L+ LD ++PD  G
Sbjct: 5   NILVVDDEIGIRELLSDILRDEGHV--VRLAENAQIARDERLKQRPDLVLLDIWMPDCDG 62

Query: 66  IEFLKELTHQPQAP-DVIFITAASDMETVREAVRCGVFDYLLKPIAYDRVQNSLERYLKY 124
           I  LKE  +       VI ++    ++T  EA R G FD+L KPIA  ++  ++   +K+
Sbjct: 63  ISLLKEWANAGLLTMPVIMMSGHGTIDTAVEATRLGAFDFLEKPIALQKLLKTVGAAIKH 122

Query: 125 ISSLRANDSVNQRHVDELFNFQAKTDQLDGLPKGIDELTLI 165
              L A+  +N     +    Q    +L+ L +  + L LI
Sbjct: 123 TEHL-AHTEINLSSFGKSAVIQELKQRLEQLARHKNTLFLI 162