Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  134 bits (337), Expect = 3e-36
 Identities = 92/309 (29%), Positives = 153/309 (49%), Gaps = 24/309 (7%)

Query: 1   MLKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVR 60
           M +   + +LHTF   AQ  +F+ AA  LH+T GA+S+Q+  LE+ LG++LF+R +RG+R
Sbjct: 1   MKRLPPLPALHTFWVTAQCCNFTRAAEQLHITQGAVSRQIAGLESHLGYALFQRQARGLR 60

Query: 61  LTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
           LTE GR      Q+ +  + + +  +   + R+ ++LK + +   +WL+PRL  + +  P
Sbjct: 61  LTEEGREWSLRAQQVFGLLGEAVEQI--GSRRQTLQLKAS-TCVMRWLLPRLMQWQKERP 117

Query: 121 EIQIQ-TFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWL 179
           ++ ++ T      VD  R  +D A+ Y  +     +A+ L +E L PV +   L      
Sbjct: 118 DVPVELTTTVAYTVDFRREQFDAAVIYAPIAEQSAEARHLFDEQLTPVCAPALL------ 171

Query: 180 QEDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPE-RRDHYFNRTDMAMSA 238
                     QQ VLLH          +++W  W       L    + H+F   D+AM+ 
Sbjct: 172 -NGVCTPADLQQQVLLHPTRD------ERDWALWLKAANTRLGNLSQGHHFETLDLAMTV 224

Query: 239 AEAGVGIAMARTALLSNELDTGRLVTPF-APIRAKAGYFLITHQATDAT---QVFCQWLQ 294
           A  G G+A+  +AL+  ++  GRLV PF   +    GY+L+    T  +   +    WL 
Sbjct: 225 ASQGSGVAIGDSALIGEDVKAGRLVMPFELRVPTGMGYYLVYPPGTKPSAGLEALMDWLV 284

Query: 295 KQIPVQVSQ 303
            Q   Q+SQ
Sbjct: 285 SQ--AQLSQ 291